prot_P-littoralis_Contig202.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig202.30.1
Unique Nameprot_P-littoralis_Contig202.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length230
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig202.30.1 vs. uniprot
Match: D7G0W8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W8_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 2.120e-122
Identity = 186/229 (81.22%), Postives = 204/229 (89.08%), Query Frame = 0 
Query:    3 EPKAVRSRSQSPPRSPLSRVASRTKLVLDSQRRNDD-DKGEPLVSPARTFSPVAAGRRLLKPSSPRKVPRRPVATEESILSKYLSQSLPAKLSAVLTVVAIAVVVALFFGEGDGPKLVKRDASLVPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSVGVYGGKSPYAQKAKLWNAGTGAKGGA-TGSLYELVYSGDRVVLNKDGKVKWSSSLKSLPKNMQPWPFAQ 229
            EPKAVRSRS+SP RSPL+R AS+T LV+D+Q  +D  DKGEPL+SPAR FSP+ AG+RLLKPSSPRK+  RPV  EES+LS+Y SQSLPAKLSAVL+VVAIAV  ALFFGEGDGPKLVKRDA L PGDRLKGGQYISFCTSIIATGCKPKYFELGRDGS+GVYGGKSPYAQKAKLW AGTGAKGG    + YELVY+GDRVVLNKDGKVKWSSS+KSLPKNM+PWP AQ
Sbjct:    5 EPKAVRSRSKSPTRSPLARTASKTNLVIDTQAGHDAADKGEPLISPAR-FSPITAGKRLLKPSSPRKITMRPVVKEESMLSRYFSQSLPAKLSAVLSVVAIAVAAALFFGEGDGPKLVKRDAPLFPGDRLKGGQYISFCTSIIATGCKPKYFELGRDGSLGVYGGKSPYAQKAKLWTAGTGAKGGGGKEAFYELVYTGDRVVLNKDGKVKWSSSVKSLPKNMRPWPLAQ 232
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0W8_ECTSI2.120e-12281.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig202contigP-littoralis_Contig202:131920..138729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig202.30.1mRNA_P-littoralis_Contig202.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig202 131721..140449 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig202.30.1 ID=prot_P-littoralis_Contig202.30.1|Name=mRNA_P-littoralis_Contig202.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=230bp
MSEPKAVRSRSQSPPRSPLSRVASRTKLVLDSQRRNDDDKGEPLVSPART
FSPVAAGRRLLKPSSPRKVPRRPVATEESILSKYLSQSLPAKLSAVLTVV
AIAVVVALFFGEGDGPKLVKRDASLVPGDRLKGGQYISFCTSIIATGCKP
KYFELGRDGSVGVYGGKSPYAQKAKLWNAGTGAKGGATGSLYELVYSGDR
VVLNKDGKVKWSSSLKSLPKNMQPWPFAQ*
back to top