prot_P-littoralis_Contig201.33.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig201.33.1
Unique Nameprot_P-littoralis_Contig201.33.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length246
Homology
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BLAST of mRNA_P-littoralis_Contig201.33.1 vs. uniprot
Match: A0A6H5JL72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL72_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 8.750e-47
Identity = 129/244 (52.87%), Postives = 138/244 (56.56%), Query Frame = 0 
Query:    1 EDVWDDRAILKAFDDALNTHTRKPVDEVEARKWNKHAAQEVAAQPSTAGSRLPMSAPSSPRGRTGSNKIGGPSSXXXXXXXXXXXXDRRSVDGGQSQSHNQGFQAADRRFASLLAKGNAEASSEGGRAPRTLPAGIPGPWQPVAGPSEGAQYSGATP-QDGGGQRYGYGRPGPSDPYQWGPEYSGGAHGFPYPSRGAPQHPPPHPPSGAAVAN-FEEGGPGRHGLPPPPQPPHPEAGPHAAAFQ 242
            EDVWDDRAILKAFDDALN+H+RKPVD VEARKWNKHAAQ VA QP TA  R                       XXXXXX        +      S   +QGFQ ADRRFASLLAKGN + SS GG A   + AGIPGPW+PVAGP+EG QY  A   QD  GQR  Y RP   DP     EY G AH + YPSR AP HP             FEEGG G   L       HP  GPHAAAFQ
Sbjct:   30 EDVWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAVQPHTAEGRPQQXXXXXXXXXXXXXXXXXXXXXXXXXXTSPAGAGYQRPRSVPSGHRDQGFQEADRRFASLLAKGNVKTSSGGGTA-GVVRAGIPGPWEPVAGPTEGQQYGRAAGHQDDLGQRTEYARPEAYDPNAQQEEYGGEAHNYSYPSRAAPHHPQXXXXXXXXXXXXFEEGGRG-FPLXXXXXXXHPGVGPHAAAFQ 271
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BLAST of mRNA_P-littoralis_Contig201.33.1 vs. uniprot
Match: D8LRK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK9_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 3.600e-38
Identity = 104/178 (58.43%), Postives = 111/178 (62.36%), Query Frame = 0 
Query:    1 EDVWDDRAILKAFDDALNTHTRKPVDEVEARKWNKHAAQEVAAQPSTA-GSRLPMSAPSSPRGRTGSNKIGGPSSXXXXXXXXXXXXDR-RSVDGGQSQSHNQGFQAADRRFASLLAKGNAEASSEGGRAPRTLPAGIPGPWQPVAGPSEGAQYSGATP-QDGGGQRYGYGRPGPSDP 175
            ED+WDDRAILKAFDDALN+H+RKPVD VEARKWNKHAAQ VA QP TA G                         XXXX         R RSV  G     +QGFQ ADRRFASLLAKGNAEASS GG A   + AGIPGPW+PVAGP+EG QY  A   QD  GQR  Y RPG  DP
Sbjct:   13 EDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAVQPHTAEGKPQXXXXXXXXXXXXXXXXXXXXXXXXXXTSPAGAGYQRPRSVPSGH---RDQGFQEADRRFASLLAKGNAEASSGGGTA-GVVRAGIPGPWEPVAGPTEGQQYGRAAGHQDDPGQRTEYARPGAYDP 186
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL72_9PHAE8.750e-4752.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRK9_ECTSI3.600e-3858.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig201contigP-littoralis_Contig201:142170..144281 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig201.33.1mRNA_P-littoralis_Contig201.33.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig201 142170..144281 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig201.33.1 ID=prot_P-littoralis_Contig201.33.1|Name=mRNA_P-littoralis_Contig201.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=246bp
EDVWDDRAILKAFDDALNTHTRKPVDEVEARKWNKHAAQEVAAQPSTAGS
RLPMSAPSSPRGRTGSNKIGGPSSSTNSTAAAAYHHDRRSVDGGQSQSHN
QGFQAADRRFASLLAKGNAEASSEGGRAPRTLPAGIPGPWQPVAGPSEGA
QYSGATPQDGGGQRYGYGRPGPSDPYQWGPEYSGGAHGFPYPSRGAPQHP
PPHPPSGAAVANFEEGGPGRHGLPPPPQPPHPEAGPHAAAFQVPH*
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