prot_P-littoralis_Contig200.94.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig200.94.2
Unique Nameprot_P-littoralis_Contig200.94.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length216
Homology
BLAST of mRNA_P-littoralis_Contig200.94.2 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 8.000e-42
Identity = 94/215 (43.72%), Postives = 126/215 (58.60%), Query Frame = 0
Query:    5 WVAKFVFGDGNCAWRALAMAIWGTDVYWVQLKLVVLAWSVANTELLLAEGRALYDDTKFFTDEIHSRYGRFEQGDDVSTSDNRFE---MLIASVEYYTTDKTWGSDLTMLMASQAPRIPVKMLNPMDK--KSRDEYDAQDSQPLHGLGRKGDDMGDYRHSQVFVPDEAALVYRGVGPGENALVVEEAAVALTDGYRQAGSSELADIAEINRNTIC 214
            WVA +V GDGNC WR+LA  +W +D YW QLKLVVLAW+ A+ E L++EGR L D +  F+D+IH+  G       V  + +  +   ML+ASV Y   D  WG D T+L+ASQA +I VK+L+P D   + RDE  A     + G GRKGD + D R SQ F+ D+A       G G    +V EA V LT    QA   EL ++ E+ ++T C
Sbjct:    6 WVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVGAAPSVAQTSRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRKRDESSATPG-TIRGAGRKGDKVDDTRLSQTFLADDAVSCLHIQGGGR---MVAEATVVLTSCTGQASVGELDNLVEVTKSTAC 216          
BLAST of mRNA_P-littoralis_Contig200.94.2 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.600e-28
Identity = 81/223 (36.32%), Postives = 123/223 (55.16%), Query Frame = 0
Query:    1 MRNKWVAKFVFGDGNCAWRALAMAIWGTDVYWVQLKLVVLAWSVANTELLLAEGRALYDDTKF--FTDEIHSRY-GRFEQGDDVSTSDNRFEMLIASVEYYTTDKTWGSDLTMLMASQAPRIPVKMLNPMDKKSRDEYD----AQDSQPLHGLGRKGDDMGDYRHSQVFVPDEAA--LVYRGVGPGENALVVEEAAVALTDGYRQA--GSSELADIAEINRNT 212
            +R  +VA +V GDGNC WR++A A+WGTD YW QLKL VLAWS  N E L+ EG AL+       + DEIH+++  R   G      D+   ML+ S+  ++ ++ WG  L  ++ ++   + +KM +P D ++R   D    A  +   +G G + D+ GD+R+S   VP      ++ RGV   E+ +VVEE A+ +   Y  A  G   L+DI  I  +T
Sbjct:   98 LRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSGAAAKATASYGGGSE-DEFGDHRYSFTKVPTAGRKEIILRGVSDEED-IVVEEIAITMAS-YDSAVVGDGSLSDIPVIEADT 317          
BLAST of mRNA_P-littoralis_Contig200.94.2 vs. uniprot
Match: A0A6H5JP78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP78_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.810e-22
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:   42 WSVANTELLLAEGRALYDDTKFFTDEIHSRYG-RFEQGDDVSTSDNRFEMLIASVEYYTTDKTWGSDLTMLMASQAPRIPVKMLNPMDKKSRDEYDAQDSQPLHGLGRKGDDMG--DYRHSQVFVPDEAALVYRGVGPGENALVVEEAAVALTDGYRQAGSSELADIAEINRNTIC 214
            W  AN E L++ GR L D TK ++ +IH  +     + DD +T  N+ +MLIASV  ++    WG DLTML+ASQA RI VK++  +D  SR   +A  +        + D++   D RHSQ F+P +A    R VG G+    V EA V LT    QA + EL ++ E+ + T C
Sbjct:    9 WPAANAEDLVSRGRILSDFTKNYSSDIHGAFAVTANRLDDAATVANKSKMLIASVADFSKPACWGGDLTMLLASQALRITVKLVCSIDMMSRKRDEASATLETDRGSTRKDNINPEDNRHSQTFLPGDAVSSLR-VGGGDR--TVTEATVILTSSCTQASAGELDNLVEVTKATTC 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.94.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K454_9PHAE8.000e-4243.72SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJS4_9PHAE2.600e-2836.32SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JP78_9PHAE2.810e-2238.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 1..150
e-value: 3.1E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:309988..310901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.94.2mRNA_P-littoralis_Contig200.94.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig200 309622..312266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig200.94.2 ID=prot_P-littoralis_Contig200.94.2|Name=mRNA_P-littoralis_Contig200.94.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
MRNKWVAKFVFGDGNCAWRALAMAIWGTDVYWVQLKLVVLAWSVANTELL
LAEGRALYDDTKFFTDEIHSRYGRFEQGDDVSTSDNRFEMLIASVEYYTT
DKTWGSDLTMLMASQAPRIPVKMLNPMDKKSRDEYDAQDSQPLHGLGRKG
DDMGDYRHSQVFVPDEAALVYRGVGPGENALVVEEAAVALTDGYRQAGSS
ELADIAEINRNTICG*
back to top