prot_P-littoralis_Contig200.84.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig200.84.1
Unique Nameprot_P-littoralis_Contig200.84.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length633
Homology
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 2.590e-93
Identity = 295/671 (43.96%), Postives = 330/671 (49.18%), Query Frame = 0
Query:    1 TVELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKRSIIAEWADRATHGPREPMLPHAFLGGGGIGDSGGLGGSSRDGSSRGMGGGGGPFDRYHLPMSAAEEAAARTATAGRXXXXXXXXXSGRPSQQSHPGTGAAPTGSRRFGGEVPQPWTEDRSAAEQGR----------RLSASSSSGLPFPMAWY--GSEGYEAPEAGGVGRXXXXXXXXGARDHRHLAPHLESPMGYAPTTAEALSRRAQQQHAPLPRDAWSASPLNAEGVA-------GER--IAAGMEPSRRRTWEPPSSGGWASQPDPLL-TPQAEGMALTYGRRVRLSPPFLPS----------------RPLMRPGGESSYGAAGPSFREREAAGRPAERHGEIDPASSLPFFPPPREPADPTAGFSFHQAPNRASWRRQSYMAPWES--PGGXXXXXXXXRNDPGVPQQYP-QQPTFYDSSERPPSSXXXXXXXXXXXXYM---RGRRYYDDFRGDLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDAFRERERLEVP---SFSRHHHQTMGRFRVGGGEEERGA-EMPPGPPSPAAGAAARDGLDQQPHQMFARGGADS-AYERAVGHTSWPSGGG--------GGADHIDVQYQRGRQEAMRQEW 614
            T+ELRKSCDYCV+LKRACDGKNPCSLC+RRHKPCTRSARKKSGPAKGTKYAPRRKRS+IAEWADR T G R P+LPH F GGG                     GGGG    +  P++  + A  R A  GR     XXXX                    RFG E    W E      QGR            S S SSGLPFP  WY  G   +E  E  G  R        G    R  AP    PMGYAPTTAE LSRR QQ+H    R ++S S L             G R  + A  EP RRRT E P  G WAS  DP L +PQ    AL  G+RVRLSPP L S                R +MRPG +  Y +   S R RE AGRP ER  E+DP SSL   PPPREP DPTAGFSFH A NR SWRR S    WES  PGG        RNDP    QYP QQ   ++SS+RP   XXXXXXXXXXXX     RG    D    + +                      XXXXXX   D + ER  L  P    F RH    + R  +GGG +  G  +M  G PSP      RD       Q +A  GAD  AYE   G   W  GGG        G  DH D + ++ R E  RQ+W
Sbjct:   15 TIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADR-TSGARGPLLPHEFPGGG-------------------TRGGGGQLPHHDFPLAPIDAAGMRAA--GRAYYSGXXXX----XXXXXXXXXXXXXXXGRFGAEAL--WEEGGPLPGQGRGRRPGEEGHPSSSLSPSSGLPFP--WYAPGPSPHEETEGRGGERG-------GVGGGRGFAP---PPMGYAPTTAEELSRR-QQEHGYHHRASYSMSSLEXXXXXXXXXXXXGRRPGVPAAPEPYRRRTLELPP-GHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADY-YPSPATSPRAREMAGRPHERPRELDPESSLLSLPPPREPPDPTAGFSFHPAANRPSWRRGST---WESGSPGGGGDGRPVDRNDPRAYHQYPPQQLGSFESSDRPXXXXXXXXXXXXXXXXXXXXRGASLGDRRYRNFDREAGEDGQGRGRSVVEWPLPHGXXXXXXXXXDPYHERVELPPPPPHGFDRH--LPLERPLMGGGRQGEGRHDMLLGAPSPP-----RD------EQGYAARGADGGAYEHPSGRARWAGGGGDQVGLPGRGSRDHRDYEQEQQRVERGRQDW 626          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 6.560e-84
Identity = 275/671 (40.98%), Postives = 310/671 (46.20%), Query Frame = 0
Query:    1 TVELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKRSIIAEWADRATHGPREPMLPHAFLGGGGIGDSGGLGGSSRDGSSRGMGGGGGPFDRYHLPMS----AAEEAAARTATAGRXXXXXXXXXSGRPSQQSHPGTGAAPTGSRRFGGEV------PQPWT-EDRSAAEQGRRLSA-SSSSGLPFPMAWYGSEGYEAPEAGGVGRXXXXXXXXGARDHRHLAPHLESPMGYAPTTAEALSRRAQQ---QHAPLPRDAWSASPLNAEGV----AGERIAAGM--EPSRRRTWEPPSSGGWASQPDPLL-TPQAEGMALTYGRRVRLSPPFLPS----------RPLMRPGGESSYGAAGPSFREREAAGRPAERHGEIDPASSLPFFPPPREPADPTAGFSFHQAPNRASWRRQSYMAPWESPGGXXXXXXXXRNDPGVPQQYPQ-QPTFYDSSERPPSSXXXXXXXXXXXXY-----------MRGRRYYDDFRGDLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDAFRERERLEVPSFSRHHHQTMGRFRVGGGEEERGAEM----PPGPPSPAAGAAARDGLDQQPHQMFARGGADS-AYERAVGHTSWPSGGG--------GGADHIDVQYQRGRQEAMRQEW 614
            TVELRKSCDYCV+LKRACDGKNPCSLC+RRHKPCTRSARKKSGPAKGTKYAPRRKRS+IAEWADR T G   P LPH F GGG                     GGGG    +   ++    A   AA RT  +G           G  S            G R FG E       P+P     R   E+G   S   SS GLPFP  WY S      EA G G         G               GYAPTTAE LS         H    R ++S S L AE      AG R  A    EP RRRT E P  G WAS  DP L +PQ    AL  G+RVRLSPP   S          RP+MRPG +  Y +   S R  E AGRP ER  E+DP SS+   PPPREP DPTAGFSFH A NR SWRR S        GG        RNDP    QYP  Q   ++SS+R PSS       XXXXX            + G R Y +F  +  E                 XXXXXXXX     D + E+  L  P      H  + R  +GGG +  G        P PP    G AAR G+          GGAD  AYE   G   W  GGG        G  DH D + ++ + E  RQ+W
Sbjct:    7 TVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADR-TGGAGGPPLPHEFQGGG-------------------TSGGGGQLPHHDFSLAPFDAAGMRAAERTYNSG-----------GGLSAHXXXXXXXXXXGGR-FGAEALWEEGAPRPGQGRGRWPGEEGHPSSLLPSSPGLPFP--WYASRPSPHGEAEGRG------GERGXXXXXXXXXXXXXXXGYAPTTAEELSXXXXXXGYHH----RASYSMSFLEAEXXXXXXAGRRPGAPAMREPYRRRTPELPP-GHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRPGADY-YPSPATSPRASEMAGRPHERPRELDPESSVLSLPPPREPPDPTAGFSFHPAANRPSWRRGSTWESGSPGGGGGDGRPVDRNDPRAYHQYPPPQLGSFESSDRAPSSSSWSSPGXXXXXXXXXXXXGRGASLGGDRRYRNFDREAGEDGQGRGRGVVEWPLPHGXXXXXXXX----XDPYHEQVELPPPPHGFDRHLPLERPLMGGGRQGEGKHDMLLGAPSPPRDKQGYAARGGVG---------GGADGGAYEYPSGRPRWAGGGGDQMGLPGRGSRDHRDFEQEQQQVERGRQDW 618          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 7.670e-14
Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    2 VELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKR 56
            V LRKSCD CV+LKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   60 VLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.170e-13
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    2 VELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKR 56
            V LRKSCD CV+LKRACDG++PC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.330e-12
Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    4 LRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKRSI 58
            LRKSCDYCV++KR C G  PC+LC+RR+K C RS +K+SGPAKGTKY  R+ R I
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKI 77          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 4.090e-7
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   14 LKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKR 56
            +KRACDG +PC+LCSRR K C R  R+KSGPAKG KYAPRR++
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.010e-5
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    2 VELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKRSIIAEWADRATHGPREPML 75
            V LR +CD C ++KR CDG  PC+ C RR +PC  S ++KSGP KG+K      R +IA   D   +    P L
Sbjct:  205 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK------RKLIAADEDLLENRQSRPKL 272          
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.220e-5
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    2 VELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKYAPRRKRSIIAEWADRATHGPREPML 75
            V LR +CD C ++KR CDG  PC+ C RR +PC  S ++KSGP KG+K      R +IA   D   +    P L
Sbjct:  181 VVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK------RKLIAADEDLLENRQSRPKL 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.84.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPF9_ECTSI2.590e-9343.96Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE6.560e-8440.98Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LPZ9_ECTSI7.670e-1474.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE8.170e-1370.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKM5_ECTSI3.330e-1265.45Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5JII0_9PHAE4.090e-769.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LM00_ECTSI2.010e-543.24Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE2.220e-543.24Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 6..40
e-value: 6.0E-5
score: 23.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 7..36
score: 8.554999
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 5..35
e-value: 2.91201E-6
score: 42.2654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..633
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..482
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 4..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:264733..267094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.84.1mRNA_P-littoralis_Contig200.84.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig200 264733..267094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig200.84.1 ID=prot_P-littoralis_Contig200.84.1|Name=mRNA_P-littoralis_Contig200.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=633bp
TVELRKSCDYCVKLKRACDGKNPCSLCSRRHKPCTRSARKKSGPAKGTKY
APRRKRSIIAEWADRATHGPREPMLPHAFLGGGGIGDSGGLGGSSRDGSS
RGMGGGGGPFDRYHLPMSAAEEAAARTATAGRPPFYSSSSSSGRPSQQSH
PGTGAAPTGSRRFGGEVPQPWTEDRSAAEQGRRLSASSSSGLPFPMAWYG
SEGYEAPEAGGVGRGGGGGGGDGARDHRHLAPHLESPMGYAPTTAEALSR
RAQQQHAPLPRDAWSASPLNAEGVAGERIAAGMEPSRRRTWEPPSSGGWA
SQPDPLLTPQAEGMALTYGRRVRLSPPFLPSRPLMRPGGESSYGAAGPSF
REREAAGRPAERHGEIDPASSLPFFPPPREPADPTAGFSFHQAPNRASWR
RQSYMAPWESPGGGGGGSGSGRNDPGVPQQYPQQPTFYDSSERPPSSWNS
PGGGGGGGDYMRGRRYYDDFRGDLEEARQERRGGAGGGAGGWRVLPPHGG
GGGAGVDAFRERERLEVPSFSRHHHQTMGRFRVGGGEEERGAEMPPGPPS
PAAGAAARDGLDQQPHQMFARGGADSAYERAVGHTSWPSGGGGGADHIDV
QYQRGRQEAMRQEWEMRGRGGGGGGVGAPFQWE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf