prot_P-littoralis_Contig20.211.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.211.1
Unique Nameprot_P-littoralis_Contig20.211.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length491
Homology
BLAST of mRNA_P-littoralis_Contig20.211.1 vs. uniprot
Match: A0A6H5JB15_9PHAE (AhpC-TSA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB15_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 3.320e-167
Identity = 266/350 (76.00%), Postives = 290/350 (82.86%), Query Frame = 0
Query:   73 MGKQGELMEQMAKAQRDRKQRELEEKLRESGDLPPK--DEAPKPSTATGSG-RIKPDRSWREAGVAKAPSLDSKAAAPAAPARPQPQRAGSSAGGTKTPAAAAGMGGKVWPSTREEGRSGAEYNEYEQLLESTGDHSGSRKSPEVENPKAAYKDWDSMRDQAQWDAVIAGKKPVRNRSPVASETEYSDFEAMLSGGARLSANSLGLQAAEKKIAKRVEKKAQLAFSRGDFAPLDPWRTLSDMEGEK----VNFGLFRGTKPLLVVAEPNPGSGEMKQALYELNTRMPRKLVDVVAVTVDTPAANRKLAKKSRIQFPVLSDEAREWMLAYRVTQGGLRDNMAFLIEPDLGR 415
            MGKQGELMEQMAKAQRDR +RELEEKLRESGDLP +  D+A KP+ A G+  RIKPDRSWR+AG AK PS           A              KT   AAG+GGKVWPSTREEGRSG +Y EY QLLESTGDHSGSRKSPEVENP+A Y DW++MRD+AQWDAV+AGKKPV NRSPVASETEYSDFEAMLSGGAR+S+NSLGL+AAEKK+AKRVEKK  L FSRGDFAPLDPWR LSD++G K    VNFGLF+GTKPLLVVAEP PGSG MKQA+YELNTRMPRKLVDVVAVTVD PA+NRK+AKKSRI FPVLSDE  EWMLAYRVTQGGLR+NMAFLIEPDLGR
Sbjct:    1 MGKQGELMEQMAKAQRDRMKRELEEKLRESGDLPKEEDDDAAKPAAAKGAAARIKPDRSWRQAGAAKPPS-----------ASXXXXXXXXXXXXXKT--GAAGVGGKVWPSTREEGRSGDKYEEYNQLLESTGDHSGSRKSPEVENPRAVYTDWETMRDKAQWDAVVAGKKPVVNRSPVASETEYSDFEAMLSGGARISSNSLGLKAAEKKLAKRVEKKVDLTFSRGDFAPLDPWRLLSDVDGNKASGAVNFGLFQGTKPLLVVAEPKPGSGAMKQAMYELNTRMPRKLVDVVAVTVDPPASNRKVAKKSRILFPVLSDEGGEWMLAYRVTQGGLRENMAFLIEPDLGR 337          
BLAST of mRNA_P-littoralis_Contig20.211.1 vs. uniprot
Match: A0A835YU18_9STRA (AhpC-TSA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU18_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.370e-29
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0
Query:  294 FSRGDFAPLDPWRT-LSDMEGEKVNFGLFRGTKPLLVVAEPNPGSGEMKQALYELNTRMPRKLVDVVAVTVDTPAANRKLAKKSRIQFPVLSDEAREWMLAYRVTQGGLRDNMAFLIEPDLGR 415
            F  GDFAPL+ W   L D EG   ++   RG +PL+++A+  P + +M++ L ELN R PR   D+VA+T DTPA NR++AKKS + FP+LSDE+REW+ AY VT     + M F++EP  GR
Sbjct:  144 FEPGDFAPLEVWAAALRDTEGAAASYASVRGARPLVIIADARPANADMRETLIELNRRFPRAAADLVAITPDTPAQNRRVAKKSNLFFPLLSDESREWLRAYLVTARVPWEKMVFVLEPRYGR 266          
BLAST of mRNA_P-littoralis_Contig20.211.1 vs. uniprot
Match: A0A7S3XLL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLL3_HETAK)

HSP 1 Score: 100 bits (249), Expect = 5.930e-20
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0
Query:  291 QLAFSRGDFAPLDPWRTLSDMEGEKVNFGLF-RGTKPLLVVAEPNPGSGEMKQALYELNTRMPRKLVDVVAVTVDTPAANRKLAKKSRIQFPVLSDEAREWMLAYRVTQGGLRDNMAFLIEPDLGR 415
            +   + GD APLD W  L+  +G    F  F  G + ++VVA+      +MK AL ELN R P++   +VAVT D    NRKLAKK+++ FP+LSD  + W+ AY V    L +   F++EP++G+
Sbjct:  142 EATLAEGDLAPLDVWAALTTADGGGARFRNFVEGDQLVVVVADARKDCADMKAALIELNARFPKQAATLVAVTADLAHENRKLAKKAKLTFPLLSDPDKAWLKAYGVQNDRLLEKQIFILEPNMGK 267          
BLAST of mRNA_P-littoralis_Contig20.211.1 vs. uniprot
Match: A0A7S2SV41_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV41_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.290e-7
Identity = 61/199 (30.65%), Postives = 89/199 (44.72%), Query Frame = 0
Query:  237 IAGKKPVRNRSPVASETEYSDFEAMLSGGAR----LSANSLGLQAAEK--KIAKRVEKKAQLAFS---RGDFAPLDPWRTLSDMEGEKVNFGLFRGTKPLLV-VAEPNPGSGEMKQALYELNTRMPRKL-VDVVAVTVDTPAANRKLAKKSRIQFPVL---------SDEAREWMLAYRVTQGGLRDNMA-FLIEPDLG 414
            +A     R+  P  +  E  D + + SGGA      S    G Q+A +   +    + +A        RG  APL+ W  L D  G    F  F   +P++V V      S  ++  + ELN R+PRK   +VV VT DTPA N++L  K+     VL         ++E   W+ AY VT+  L   +A FLI+   G
Sbjct:  137 VAPNGAWRSMGPADTRREAGDADEVQSGGAAPASTKSTGPSGFQSAFELDALISGQQNRAHRTIEYLHRGQLAPLEVWSRLVDPRGHPSPFPKFAARQPVVVAVTHFRKESALLRSCVSELNQRLPRKFPAEVVIVTRDTPARNKRLESKAVRPLTVLGSPEENNSDAEEQGAWLRAYGVTELLLDWGLAVFLIDSSTG 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JB15_9PHAE3.320e-16776.00AhpC-TSA domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YU18_9STRA6.370e-2947.97AhpC-TSA domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3XLL3_HETAK5.930e-2039.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SV41_9STRA1.290e-730.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 304..425
e-value: 2.5E-12
score: 48.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..218
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 307..412
e-value: 4.1E-8
score: 33.2
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 304..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:912762..924162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.211.1mRNA_P-littoralis_Contig20.211.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 911891..924241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.211.1 ID=prot_P-littoralis_Contig20.211.1|Name=mRNA_P-littoralis_Contig20.211.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=491bp
MRSSPLLLVTLPGWVWGYLSPAPLSSRHPKHRSTPPADGGSFRLRPETES
FPTKSHAQRCRPLFRKGFSKGGMGKQGELMEQMAKAQRDRKQRELEEKLR
ESGDLPPKDEAPKPSTATGSGRIKPDRSWREAGVAKAPSLDSKAAAPAAP
ARPQPQRAGSSAGGTKTPAAAAGMGGKVWPSTREEGRSGAEYNEYEQLLE
STGDHSGSRKSPEVENPKAAYKDWDSMRDQAQWDAVIAGKKPVRNRSPVA
SETEYSDFEAMLSGGARLSANSLGLQAAEKKIAKRVEKKAQLAFSRGDFA
PLDPWRTLSDMEGEKVNFGLFRGTKPLLVVAEPNPGSGEMKQALYELNTR
MPRKLVDVVAVTVDTPAANRKLAKKSRIQFPVLSDEAREWMLAYRVTQGG
LRDNMAFLIEPDLGRRFRNEGGEGARKMCHVPGCCCRALLGVNKIHVSYL
YHAQDASEVNEPLKLQRVILAFRSDPPPYPPISKLHISAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf