prot_P-littoralis_Contig20.202.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.202.3
Unique Nameprot_P-littoralis_Contig20.202.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length384
Homology
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BLAST of mRNA_P-littoralis_Contig20.202.3 vs. uniprot
Match: D8LJL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJL2_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.430e-53
Identity = 111/177 (62.71%), Postives = 131/177 (74.01%), Query Frame = 0 
Query:  204 GRGATAGSGPSRRDAQDNAAGSSQRSYSTSRAATSVSSAPAAAPPVKSKFDLEGFVEMLEGGLIVTKINRQGRAKVRTLYYHRQDEMLWWNEPGTRPGRPRNPSSLLYLRKEQPLPVESLLEVKMADELRDPFCFDEDVDKSFQLVFPARTVDLVAKDAEEATLLAKGFLELKASTC 380
            G G+ +  GPS  ++++ +     +S S SR A  V++APA A P    FDL GF E L GGLIVTKINRQGRAKVR L+Y RQ+ MLWWNEPG   G P   SSLL ++KEQPL V SL++V+MAD+L +PFCFD DVDKSFQLVFPARTVDLVAKDAEEA LLA+GF ELK S C
Sbjct:  190 GAGSRSQGGPSEYNSRNGS-----QSSSGSRPAA-VAAAPAPAEPA---FDLAGFEEKLGGGLIVTKINRQGRAKVRALFYDRQERMLWWNEPGR--GSPHR-SSLLSIKKEQPLAVASLIKVEMADQLDEPFCFDGDVDKSFQLVFPARTVDLVAKDAEEAALLARGFQELKMSAC 354
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.202.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJL2_ECTSI2.430e-5362.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..157
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 88..131
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 255..380
e-value: 1.4E-6
score: 30.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:850065..866540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.202.3mRNA_P-littoralis_Contig20.202.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 849870..866540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.202.3 ID=prot_P-littoralis_Contig20.202.3|Name=mRNA_P-littoralis_Contig20.202.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=384bp
MNFKACCGLLAGNKDDQDHDYEDVEQPLPKPRLAAGLRPKVWKELPYSSS
ASNIYAAAGYSAKRTTGSRRTHGTVAASSAPSTSDRRRQQQQQKQQQQQQ
QQQQQQQQQQQQSEEQHQLPTMEPLKPLRRGSSGSGGSSGSSSRATARSS
RSASSGTAGGGGRGHADSRAAGGIVRGRHSSGAGTEAMRPAPKGAAGTEI
LVGGRGATAGSGPSRRDAQDNAAGSSQRSYSTSRAATSVSSAPAAAPPVK
SKFDLEGFVEMLEGGLIVTKINRQGRAKVRTLYYHRQDEMLWWNEPGTRP
GRPRNPSSLLYLRKEQPLPVESLLEVKMADELRDPFCFDEDVDKSFQLVF
PARTVDLVAKDAEEATLLAKGFLELKASTCVQN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf