prot_P-littoralis_Contig199.72.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig199.72.2
Unique Nameprot_P-littoralis_Contig199.72.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length390
Homology
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BLAST of mRNA_P-littoralis_Contig199.72.2 vs. uniprot
Match: A0A6H5KR72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR72_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.810e-43
Identity = 95/143 (66.43%), Postives = 106/143 (74.13%), Query Frame = 0 
Query:   12 AAGKGNFLGHSTWHPQASVDS---PGRTASAPDGAPTTLHITPSGASRPAGDGASKRSGFNMKGLLKSVSTHSFSRKTTSRGMPSHGRKNSASQVDTKGWFLEKQGKLDQAELMYSRHCVRAQKHHGKESLHLADNLDRLVHV 151
            AAGKG  LGHSTWHP+AS  +   P       DGA T+L+ +P  A R     A K+SGFNMKGLL SVS+HSFSR+T   G      K S+S+VDTKGWFLEKQGKLDQAELMYSRHCVRAQK+HGKESL LADNLDRLVHV
Sbjct:    5 AAGKGELLGHSTWHPEASSAAEAAPRPNGLVQDGASTSLNNSPERARR----AAPKKSGFNMKGLLSSVSSHSFSRRTKPGGA-----KKSSSEVDTKGWFLEKQGKLDQAELMYSRHCVRAQKNHGKESLSLADNLDRLVHV 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig199.72.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR72_9PHAE3.810e-4366.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..259
NoneNo IPR availablePFAMPF13424TPR_12coord: 147..216
e-value: 7.4E-16
score: 58.2
coord: 227..298
e-value: 2.7E-13
score: 50.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..105
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 97..216
coord: 181..315
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 142..175
e-value: 46.0
score: 9.1
coord: 226..259
e-value: 120.0
score: 5.6
coord: 268..301
e-value: 90.0
score: 6.6
coord: 184..217
e-value: 0.17
score: 21.0
coord: 100..133
e-value: 190.0
score: 3.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 184..217
score: 8.3489
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 88..208
e-value: 2.3E-21
score: 78.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 209..322
e-value: 1.1E-22
score: 82.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 178..301
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 105..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig199contigP-littoralis_Contig199:406283..422081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig199.72.2mRNA_P-littoralis_Contig199.72.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig199 404762..422443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig199.72.2 ID=prot_P-littoralis_Contig199.72.2|Name=mRNA_P-littoralis_Contig199.72.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=390bp
MPSPGAPAAAAAAGKGNFLGHSTWHPQASVDSPGRTASAPDGAPTTLHIT
PSGASRPAGDGASKRSGFNMKGLLKSVSTHSFSRKTTSRGMPSHGRKNSA
SQVDTKGWFLEKQGKLDQAELMYSRHCVRAQKHHGKESLHLADNLDRLVH
VLHKEGKLEEAEPLCRRALDIRRKSLGEQNDQVANAMVTLGRVLEEKGQY
TDALIYLKKGLTIREEILEEGHPDTISALAWIGDICSKQEEYEEALDIAR
RVAQAYETKLGPDDIKVASSLNNVAGLLATTGNTEEALPLFARSHEIYVD
HLGEHHPHSVATQLWVQQLSAPPPPPRRARARPPQQQQQYRPGPADGNGN
GPYQYQCRHVSSHPPPLAEGNHGDEEGSEHSPGHQPVCF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf