prot_P-littoralis_Contig198.60.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI) HSP 1 Score: 1439 bits (3725), Expect = 0.000e+0 Identity = 756/798 (94.74%), Postives = 777/798 (97.37%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXX---------ADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKTGK 789
MRLDLDGLDVFFPYDF+YPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLG EG+KVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFG+EKGWCPY+LARHII+HANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKV E+K+TDQARLNAEYQRLVSGLA+SGLGRASGGV G+A AG XXXXXXXXXXXXXXXXXXXXXXX AD+IPANP LPADILQEAVPGNIRRAEHF+SFMRKVVEHFKTRVRVQSVESETPLAF+HRMQQVTALERKPLKFAYSRLNSLLRTLEV GLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERF+SVVITSGTLSPLDLYPKLLGF+PVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGAL+IELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGA+FLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLR+TFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFL+E+HLNMSADNA AMARMFLKDMAQPLDPLRLKGTMLD +KVA RN +KTGK
Sbjct: 1 MRLDLDGLDVFFPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSA--AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLDPLRLKGTMLDTKKVAARNREKTGK 796
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA) HSP 1 Score: 1157 bits (2992), Expect = 0.000e+0 Identity = 583/825 (70.67%), Postives = 672/825 (81.45%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA----EAGG----------------------------GGE------LCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKT 787
M L + V+FPYD+ YPEQY YM ELK +LDAKGHCLLEMPTGTGKTVCLI+LIT+YQ+ HPEVGKLIYCTRTVPEM+KC+EE+KRVI YR++QLG G KVLALCLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR++A + GG GGE LC+F+E Y ANGSD+ MP+GIYS++DLK+FGREKGWCPY+LARH+I+HAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +L+AASRCLG++SSKV ++K+ DQ RLN EYQRLV+GLA++ G GV G A +++ ANP LPAD+L EAVPGNIRRAEHF+SF+RK++EH K R+R +VESETPLAFLHR+QQ T +ERKPL+F YSRLNSLLRTLEV LDDFRPL VADFATLV TY EGFA+VIEP GSV+PGVYEPV++LACLDASLAI+PVFERF SVVITSGTLSP+DLYPKLL F+PVVR++L MST R+CICPLVVTRGSDQL +STKFD R+DPSVVRNYG+LIIELAA +PDG+VCFFTSYSYME IV++W E GVL +V EKKLIF+ETKDVVETTLALDNFKRACD GRGA+F SVARGKVAEGIDFDRHYGR VVMFGVPFQYTLSHVLRARLEYLRATFQIRE DFL FDA+RQ AQC+GRVIRSKTDYGL++LADSRYNRHDKRSKLP W+ QFL ESHLN+S D AI++ RMFLK+MAQP+D +LK + DA KV + T
Sbjct: 1 MIFTLGDITVWFPYDYCYPEQYAYMSELKTTLDAKGHCLLEMPTGTGKTVCLIALITAYQYQHPEVGKLIYCTRTVPEMVKCVEEIKRVIRYREEQLGPAGSKVLALCLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQRAGVKRDKGGARGANGXXXXXXXXXXXXXXXXXXXXAQGGEVDASIELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAGPLPAGVQGIA----------------------------DNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDGIVCFFTSYSYMERIVAQWQESGVLSKVYEKKLIFLETKDVVETTLALDNFKRACDSGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPFQYTLSHVLRARLEYLRATFQIREADFLNFDALRQAAQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPPWITQFLTESHLNLSTDMAISLTRMFLKEMAQPIDRDQLKTILCDAHKVKAMDAQAT 797
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC) HSP 1 Score: 1073 bits (2774), Expect = 0.000e+0 Identity = 531/782 (67.90%), Postives = 640/782 (81.84%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPV--LPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVA 780
+R DLDGLD+FFPYD LY EQY+YMLELKR+LDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEM+KC+EE+++VI YR +GAEG KVLA+CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR++ ELC+++E Y NG+DA + +GIYSLDDLKE G+++GWCPY+LARHII+HAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSLD A+RCLGK+S++V ++K+ D +LN EYQRLV GLAESG +GG AG A AD++ ANPV LP + QEAVPGNIRRAEHF++FM+KVVEH KT +RV S + ++PLAFLH +Q TALE KPL+F YSRLNSLLRTLEV LD+F PL DVADFATLV TY EGF V+ EP GS +PG+ +PV++L+CLDASLAI+PVFERF SV+ITSGTLSPLDLYP LL F PVVR ++ MS RK ICPLVVT+GS Q ++T+F++RDDPSV R+YG L++E+A VPDGVVCFFTSYSYME +V +W++ G+L+++LE+KLIFIETKDVVETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV++ GVPFQYTLS V+R RLEYL+ F I DFLTFDA+RQ AQC+GRVIRSK DYGL+I ADSRYNR+DKR+KLP W+L + +HL++S +A+ R FLK+MAQP+D L+ +LD ++A
Sbjct: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGA------LGGAAGAGSAASP--------------------ADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIA 757
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA) HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0 Identity = 504/768 (65.62%), Postives = 609/768 (79.30%), Query Frame = 0
Query: 5 LDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEG--DKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRV----RVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLD 765
L+G+DV+FPY +YPEQY YMLE+K +LDAKGH LLEMPTGTGKT C++SL+ SYQ AHPE+GKLIYCTRTVPEM KCI ELKRV+ +G G +LALCLSSRRN+CIHE V+E +DREAVD CRDMTASWVR+KA+A G E C+F+E Y GSDAA+PNGI+SLDDLK GREKGWCPY+LARH+I+HA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L IS+KV E+K D +RL EY+RLV+GL + G GG D+I ANP LPAD+L EAVPGNIRRAEHF+SF+R ++ H + R+ +VE+ETPLAF+HR+ T E KPLKFAYSRLNSLLRTLEV LD + PL DV D TLV TY++GFA+VIEP GS++PGVYEP ++LACLDAS+AI+PVFERFSSV+ITSGTLSPLDLYP+LL F PV+R +L MS R ICPLV+T+GSDQ +ST+F+ RD+P VVRNYGAL+++LA+ +PDG+V FFTSY YME IV +WD L V +R+LEKKL+FIETKDVVETT+AL+N+KRAC+CGRGAVFLSVARGKVAEGIDFD+HYGR V++ GVP+QYTLSH+LRARLEYLR TFQIRE DFLTFDA+RQ AQC+GRV+RSK DYG+++ ADSRYNR+DKRSKLP W+ QFL+ SHL++S D A+ + + F+++M QP+D
Sbjct: 46 LEGMDVYFPYKKMYPEQYKYMLEMKHALDAKGHGLLEMPTGTGKTACVLSLVVSYQLAHPEMGKLIYCTRTVPEMSKCIGELKRVVQNILAHVGQAGAASSLLALCLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQASPGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLND--------GAGGQT-----------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDGIVVFFTSYMYMEKIVFEWDRLQVFERLLEKKLVFIETKDVVETTMALENYKRACNCGRGAVFLSVARGKVAEGIDFDQHYGRCVMLIGVPYQYTLSHILRARLEYLRTTFQIREADFLTFDALRQAAQCVGRVMRSKKDYGVMVFADSRYNRYDKRSKLPPWIQQFLKASHLSLSTDMALDIIKGFMREMGQPID 776
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA) HSP 1 Score: 997 bits (2578), Expect = 0.000e+0 Identity = 492/788 (62.44%), Postives = 605/788 (76.78%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKTG 788
MR L+ +DVFFPY +Y EQ+DYM+ELKR+L+A GH LEMPTGTGKTVCL+SLITS QFA PE+GK IYCTRTVPEM+KC+EELKRV+ YR + +GAEG K+LALCLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK+A+ G ELCEF+E Y ANG+D A+P GIYSL+DL++ GRE+GWCPY+LARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + + LDA++R LG ++SKV E+K +D RLNAEYQRLVSGLA SG S DSI +NP LPADIL E+VPGNIR+AEHF++FMRK+V H K ++R + ETP AFLH++ ++T LE KP+KF YSRLNSLLRTLEV LDD L ++ADFATL+ TY EGFAVV+EP S++PG+ EPV+ L+CLDASLAI+PVF+RF SV+ITSGTLSP+DLYP++L F+PVV ++L MS R ICPL+VTRG + MS+ F R+D V+ NYG L+++ IVPDGVV FF SY +ME + KWDELG+L++V KL+FIETKDVVETTLALDNF+RAC+CGRG VFLSVARGKVAEGIDFDRH GRAV+MFGVPFQYT S L+ARL++L FQI E DF+TFDA+RQ +QC GRV RSKTDYGL+I ADSRYN+ KR KLP W+ QFL ++H N+S + R FL++MAQP+D +LD+ K+++ + G
Sbjct: 45 MRFRLEDVDVFFPYPSVYREQFDYMVELKRALEAPGHAALEMPTGTGKTVCLMSLITSVQFARPEMGKFIYCTRTVPEMVKCVEELKRVVNYRAECVGAEGRKILALCLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRKRAQEGASVELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGS-------------------------------YTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDGVVVFFPSYLFMEGTIVKWDELGILRQVSNYKLLFIETKDVVETTLALDNFRRACECGRGGVFLSVARGKVAEGIDFDRHLGRAVLMFGVPFQYTKSLTLKARLDFLHTRFQINEADFITFDAMRQASQCAGRVFRSKTDYGLMIFADSRYNQESKRQKLPPWIRQFLGDAHCNLSITQTASKMRRFLREMAQPVDDEARSSVLLDSSKISSLSAKLAG 801
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD) HSP 1 Score: 995 bits (2573), Expect = 0.000e+0 Identity = 496/783 (63.35%), Postives = 605/783 (77.27%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKVA 780
MR+++DGL+V FPY+ +Y EQ YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+FAHP GKLIYCTRTVPEM KC+EELK ++ YRK G D + A+CLSSRRN+C+H RV+ +D EAVDG CR MTASWVR KA G E+C F+E Y + SD +P GIY++DDLKE G +KGWCPY+L R+++ A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L ISS+V +K+ D+ARL+AEY+RLV GL S D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q ++E KP+KF Y+RLNSL+RTLEV L++F L VADFATLV TY +GF ++IEP GV++PV++LACLDASLAIRPVFERFSSV+ITSGTLSP+DLYP+LL FNPV+R +L MS R CICP+V+TRGSDQ+P+STKFD RDD SVVRNYG L++E+AA PDG+VCFF SY YME I+ +WD LGVLKRVL+ KL+FIET D+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGL+I ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L MAQP+D + +LD VA
Sbjct: 1 MRVEIDGLEVLFPYERMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTVSLLSLVLAYKFAHPTAGKLIYCTRTVPEMAKCVEELKNLVAYRKKYYGERAD-LTAVCLSSRRNMCVHPRVMAHADGEAVDGQCRKMTASWVRTKAVTHPGEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSS---------------------DAVVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLQSKLLFIETTDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLIIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDDATNVNSILLDTDGVA 760
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL) HSP 1 Score: 989 bits (2557), Expect = 0.000e+0 Identity = 496/808 (61.39%), Postives = 614/808 (75.99%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG--ELCEFFEGYSANGSDA-AMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKV----ATRNYDKTGKGEELLVKTGRG 800
MR+++DGL+V FPY+ +Y EQ YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKLIYCTRTVPEM KC+EE+K ++ YR G + K+ A+CLSSRRN+C+H RV+ +D EAVD CR MTASWVR +A G ELC ++E Y + SD +P GIYS+DDLKE G KGWCPY+L R+++ +A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L IS++V ++K+ D+ARL+AEY+RLV GL S D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q A+E KP+KF Y+RLNSL+RTLE+ L+++ L DVADFATLV TY EGF ++IEP V G ++PV++LACLDASLA+RPVFERFSSV+ITSGTLSP+DLYP+LL FNPV+R +L MS R CICPLV+TRGSDQ+P+STKFD RDD SVVRNYG L++E+A+ PDG+VCFF SY YME I+ +WD LGVLKRV++ KL+FIETKD+VETTLALDN+K+ACDCGRGAVF SVARGKVAEGIDFDRHYGR V++FG+PFQYTLSH LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL +SHLN+S D AI MA+ +L MAQP+D + +LD + V + K + E + + +G G
Sbjct: 1 MRVEIDGLEVLFPYERMYSEQLQYMRELKRALDANGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLIYCTRTVPEMAKCVEEIKHLMAYRAKYYGDQ-HKLTAVCLSSRRNMCVHPRVMAHADGEAVDAQCRKMTASWVRARANTGEHQDVELCSYYENYESRKSDENVLPPGIYSVDDLKELGIGKGWCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGLRSSSA---------------------VVAPTYVNPANQQAIDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDGV-SGAHDPVLQLACLDASLAMRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMASSCPDGMVCFFPSYLYMEKIIGQWDALGVLKRVVQHKLLFIETKDIVETTLALDNYKKACDCGRGAVFFSVARGKVAEGIDFDRHYGRCVILFGIPFQYTLSHKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVLFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAIFMAKKYLALMAQPVDEYTNVNSILLDTEGVQQWLGRHSIAKDKEDEPMPIASGNG 785
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM) HSP 1 Score: 988 bits (2554), Expect = 0.000e+0 Identity = 489/771 (63.42%), Postives = 601/771 (77.95%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-----EAGGGGELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLD 765
M++D+DGL+V FPY+ +Y EQ YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKL+YCTRTVPEM KC+EE+K+++ YR+ LG E ++ A+CLSSRRN+C+H RV+ +D E VDG CR MTASWVR KA EA E C F+E Y A SD +P G+YS+DDLK+ G +KGWCPY+L R+++ A+V+VYNYQYMLDPKV+ +VSR E ES++VFDEAHNIDNVC EALSVDLD+RSLD ASR L +SS+V +LK+ D+A+L+AEY+RLV GL S D + ANPVLP D+L EA+PGNIRRAEHF++FMR+++E+ + R+RV+ VESETP AFLH + Q ++E KP+KF Y+RLNSLLRTLEV L+++ L DVADFATLV TY +GF ++IEP S GV++PV++L+CLDASLAIRPVFERFSSVVITSGTLSP+DLYP+LL FNPV+R +L MS R ICPLV+TRGSDQ+P+STKFD RDD SVVRNYG L++E+AA PDG+VCFF SY YME I+ +WD LGVLKRVL KL+FIETKD+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLVI ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L MAQP+D
Sbjct: 1 MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLVYCTRTVPEMAKCVEEIKKLVAYRQQHLG-ERAQLTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRAKAAKAREEAAADVETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSS----------------------------------DAVVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 735
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: B8C2D9_THAPS (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2D9_THAPS) HSP 1 Score: 986 bits (2549), Expect = 0.000e+0 Identity = 499/793 (62.93%), Postives = 610/793 (76.92%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG------ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQS-----VESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEG---FAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKV 779
MR +L+GLDVFFPYD +Y EQY YM LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P GKL+YCTRTVPEM +EEL V+ YR +QLGA G VLALCLSSRRN+CIHERV+ ESDRE +D ACR MTA W +KA+ E CE+++G+ + G +MP+G+Y L++L+++G+ K WCPYYL R I+HA+VLV+NYQYMLDPKVA MVS+ELE+ES++VFDEAHNID+VC EALSVD+ +R+L+ A+R LG++SS+V +K +D ARL AEYQ LV+GL + GL A + +N VL D++ EAVPGNIRRAEHFI+FM+K+VEH KTR+R S V SETPLAFLHRM T+LE KPLKFAYSRL+SLLRTL+V LDDF L DVADFA+LV TY EG FA+++EP GS +PG +PV++LACLDASLAI P+F+RF SVVITSGTLSP+DLYPKLL F P V + +MST R CI PLV+TRGSDQLP+STKFD RDD VVRNYG++++EL + +PDGVV FFTSYSYME I+S+WD +G+L+++ + KL+FIETKDVVETTLALDN++RACD GRGAVFLSVARGKV+EGI+FDRHYGRAV+MFGVPFQYTLSH+LRARLEYL+ +QIRE DFL FDA+RQ +QC+GRVIRSK DYGL+I ADSRYNRHDKRSKLP W+LQFL + LN+S D AIA + FL+ MAQP+D LK +L +V
Sbjct: 1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGL---------------------------------LDAPAAAVGLSSN-VLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLLTLDEV 758
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA) HSP 1 Score: 979 bits (2530), Expect = 0.000e+0 Identity = 490/784 (62.50%), Postives = 603/784 (76.91%), Query Frame = 0
Query: 1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA--EAGGGGELCEFFEGY-SANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKVA 780
MR+D+DGL+V FPY+ +Y EQ YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ ++++AHP GKL+YCTRTVPEM KC+EELKR++ YR+ G E ++ A+CLSSRRN+C+H RV+ +D EAVD CR +TASWVR +A + E C F+E Y S G +A +P G+Y++DDLK G ++GWCPY+L R+ + A+V+VYNYQYMLDPKV+ MVSR E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L IS+ V +K+ D ARL+AEY+RLV GL S D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q A++ KP+KF Y+RLNSLLRTLEV L++F L VADFATLV TY +GF ++IEP GV++PV++LACLDASLAIRPVFERF+SVVITSGTLSP+DLYP+LL F+PVVR +L MS R CICP+V+TRGSDQ+P+STKFD RDD SVVRNYG+L++ELAA PDG+VCFF SY YM I+ +WD LGVLKRVL+ KL+FIET DVVETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLVI ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L MAQP D + +LD+ VA
Sbjct: 1 MRVDIDGLEVLFPYERMYAEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAFKYAHPTAGKLVYCTRTVPEMAKCVEELKRLVAYREKYYG-ERARLTAVCLSSRRNMCVHPRVMAHADGEAVDSQCRQLTASWVRARAAQQPESSVETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSS----------------------DAVVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDGMVCFFPSYLYMAKIIGQWDALGVLKRVLQSKLLFIETTDVVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLALMAQPPDEAANVNSILLDSDGVA 760 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig198.60.1 ID=prot_P-littoralis_Contig198.60.1|Name=mRNA_P-littoralis_Contig198.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=813bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|