prot_P-littoralis_Contig198.60.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig198.60.1
Unique Nameprot_P-littoralis_Contig198.60.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length813
Homology
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI)

HSP 1 Score: 1439 bits (3725), Expect = 0.000e+0
Identity = 756/798 (94.74%), Postives = 777/798 (97.37%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXX---------ADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKTGK 789
            MRLDLDGLDVFFPYDF+YPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLG EG+KVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFG+EKGWCPY+LARHII+HANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKV E+K+TDQARLNAEYQRLVSGLA+SGLGRASGGV G+A  AG XXXXXXXXXXXXXXXXXXXXXXX         AD+IPANP LPADILQEAVPGNIRRAEHF+SFMRKVVEHFKTRVRVQSVESETPLAF+HRMQQVTALERKPLKFAYSRLNSLLRTLEV GLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERF+SVVITSGTLSPLDLYPKLLGF+PVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGAL+IELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGA+FLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLR+TFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFL+E+HLNMSADNA AMARMFLKDMAQPLDPLRLKGTMLD +KVA RN +KTGK
Sbjct:    1 MRLDLDGLDVFFPYDFMYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGPEGEKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSA--AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASVVITSGTLSPLDLYPKLLGFSPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALMIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAIFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRSTFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLDETHLNMSADNAAAMARMFLKDMAQPLDPLRLKGTMLDTKKVAARNREKTGK 796          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA)

HSP 1 Score: 1157 bits (2992), Expect = 0.000e+0
Identity = 583/825 (70.67%), Postives = 672/825 (81.45%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA----EAGG----------------------------GGE------LCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKT 787
            M   L  + V+FPYD+ YPEQY YM ELK +LDAKGHCLLEMPTGTGKTVCLI+LIT+YQ+ HPEVGKLIYCTRTVPEM+KC+EE+KRVI YR++QLG  G KVLALCLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR++A    + GG                            GGE      LC+F+E Y ANGSD+ MP+GIYS++DLK+FGREKGWCPY+LARH+I+HAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +L+AASRCLG++SSKV ++K+ DQ RLN EYQRLV+GLA++  G    GV G A                             +++ ANP LPAD+L EAVPGNIRRAEHF+SF+RK++EH K R+R  +VESETPLAFLHR+QQ T +ERKPL+F YSRLNSLLRTLEV  LDDFRPL  VADFATLV TY EGFA+VIEP GSV+PGVYEPV++LACLDASLAI+PVFERF SVVITSGTLSP+DLYPKLL F+PVVR++L MST R+CICPLVVTRGSDQL +STKFD R+DPSVVRNYG+LIIELAA +PDG+VCFFTSYSYME IV++W E GVL +V EKKLIF+ETKDVVETTLALDNFKRACD GRGA+F SVARGKVAEGIDFDRHYGR VVMFGVPFQYTLSHVLRARLEYLRATFQIRE DFL FDA+RQ AQC+GRVIRSKTDYGL++LADSRYNRHDKRSKLP W+ QFL ESHLN+S D AI++ RMFLK+MAQP+D  +LK  + DA KV   +   T
Sbjct:    1 MIFTLGDITVWFPYDYCYPEQYAYMSELKTTLDAKGHCLLEMPTGTGKTVCLIALITAYQYQHPEVGKLIYCTRTVPEMVKCVEEIKRVIRYREEQLGPAGSKVLALCLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQRAGVKRDKGGARGANGXXXXXXXXXXXXXXXXXXXXAQGGEVDASIELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAGPLPAGVQGIA----------------------------DNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSVVITSGTLSPIDLYPKLLNFHPVVRSSLPMSTFRRCICPLVVTRGSDQLAISTKFDLREDPSVVRNYGSLIIELAAAIPDGIVCFFTSYSYMERIVAQWQESGVLSKVYEKKLIFLETKDVVETTLALDNFKRACDSGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPFQYTLSHVLRARLEYLRATFQIREADFLNFDALRQAAQCVGRVIRSKTDYGLMVLADSRYNRHDKRSKLPPWITQFLTESHLNLSTDMAISLTRMFLKEMAQPIDRDQLKTILCDAHKVKAMDAQAT 797          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC)

HSP 1 Score: 1073 bits (2774), Expect = 0.000e+0
Identity = 531/782 (67.90%), Postives = 640/782 (81.84%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPV--LPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVA 780
            +R DLDGLD+FFPYD LY EQY+YMLELKR+LDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEM+KC+EE+++VI YR   +GAEG KVLA+CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR++       ELC+++E Y  NG+DA + +GIYSLDDLKE G+++GWCPY+LARHII+HAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSLD A+RCLGK+S++V ++K+ D  +LN EYQRLV GLAESG       +GG AG   A                       AD++ ANPV  LP  + QEAVPGNIRRAEHF++FM+KVVEH KT +RV S + ++PLAFLH +Q  TALE KPL+F YSRLNSLLRTLEV  LD+F PL DVADFATLV TY EGF V+ EP GS +PG+ +PV++L+CLDASLAI+PVFERF SV+ITSGTLSPLDLYP LL F PVVR ++ MS  RK ICPLVVT+GS Q  ++T+F++RDDPSV R+YG L++E+A  VPDGVVCFFTSYSYME +V +W++ G+L+++LE+KLIFIETKDVVETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV++ GVPFQYTLS V+R RLEYL+  F I   DFLTFDA+RQ AQC+GRVIRSK DYGL+I ADSRYNR+DKR+KLP W+L  +  +HL++S  +A+   R FLK+MAQP+D   L+  +LD  ++A
Sbjct:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGA------LGGAAGAGSAASP--------------------ADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIA 757          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA)

HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0
Identity = 504/768 (65.62%), Postives = 609/768 (79.30%), Query Frame = 0
Query:    5 LDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEG--DKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRV----RVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLD 765
            L+G+DV+FPY  +YPEQY YMLE+K +LDAKGH LLEMPTGTGKT C++SL+ SYQ AHPE+GKLIYCTRTVPEM KCI ELKRV+      +G  G    +LALCLSSRRN+CIHE V+E +DREAVD  CRDMTASWVR+KA+A  G  E C+F+E Y   GSDAA+PNGI+SLDDLK  GREKGWCPY+LARH+I+HA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L  IS+KV E+K  D +RL  EY+RLV+GL +        G GG                               D+I ANP LPAD+L EAVPGNIRRAEHF+SF+R ++ H + R+       +VE+ETPLAF+HR+   T  E KPLKFAYSRLNSLLRTLEV  LD + PL DV D  TLV TY++GFA+VIEP GS++PGVYEP ++LACLDAS+AI+PVFERFSSV+ITSGTLSPLDLYP+LL F PV+R +L MS  R  ICPLV+T+GSDQ  +ST+F+ RD+P VVRNYGAL+++LA+ +PDG+V FFTSY YME IV +WD L V +R+LEKKL+FIETKDVVETT+AL+N+KRAC+CGRGAVFLSVARGKVAEGIDFD+HYGR V++ GVP+QYTLSH+LRARLEYLR TFQIRE DFLTFDA+RQ AQC+GRV+RSK DYG+++ ADSRYNR+DKRSKLP W+ QFL+ SHL++S D A+ + + F+++M QP+D
Sbjct:   46 LEGMDVYFPYKKMYPEQYKYMLEMKHALDAKGHGLLEMPTGTGKTACVLSLVVSYQLAHPEMGKLIYCTRTVPEMSKCIGELKRVVQNILAHVGQAGAASSLLALCLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQASPGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLND--------GAGGQT-----------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSVIITSGTLSPLDLYPRLLNFQPVIRVSLDMSVFRTPICPLVITQGSDQAQISTRFEVRDEPGVVRNYGALLLDLASTIPDGIVVFFTSYMYMEKIVFEWDRLQVFERLLEKKLVFIETKDVVETTMALENYKRACNCGRGAVFLSVARGKVAEGIDFDQHYGRCVMLIGVPYQYTLSHILRARLEYLRTTFQIREADFLTFDALRQAAQCVGRVMRSKKDYGVMVFADSRYNRYDKRSKLPPWIQQFLKASHLSLSTDMALDIIKGFMREMGQPID 776          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA)

HSP 1 Score: 997 bits (2578), Expect = 0.000e+0
Identity = 492/788 (62.44%), Postives = 605/788 (76.78%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKTG 788
            MR  L+ +DVFFPY  +Y EQ+DYM+ELKR+L+A GH  LEMPTGTGKTVCL+SLITS QFA PE+GK IYCTRTVPEM+KC+EELKRV+ YR + +GAEG K+LALCLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK+A+ G   ELCEF+E Y ANG+D A+P GIYSL+DL++ GRE+GWCPY+LARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + +  LDA++R LG ++SKV E+K +D  RLNAEYQRLVSGLA SG    S                                    DSI +NP LPADIL E+VPGNIR+AEHF++FMRK+V H K ++R    + ETP AFLH++ ++T LE KP+KF YSRLNSLLRTLEV  LDD   L ++ADFATL+ TY EGFAVV+EP  S++PG+ EPV+ L+CLDASLAI+PVF+RF SV+ITSGTLSP+DLYP++L F+PVV ++L MS  R  ICPL+VTRG +   MS+ F  R+D  V+ NYG L+++   IVPDGVV FF SY +ME  + KWDELG+L++V   KL+FIETKDVVETTLALDNF+RAC+CGRG VFLSVARGKVAEGIDFDRH GRAV+MFGVPFQYT S  L+ARL++L   FQI E DF+TFDA+RQ +QC GRV RSKTDYGL+I ADSRYN+  KR KLP W+ QFL ++H N+S     +  R FL++MAQP+D       +LD+ K+++ +    G
Sbjct:   45 MRFRLEDVDVFFPYPSVYREQFDYMVELKRALEAPGHAALEMPTGTGKTVCLMSLITSVQFARPEMGKFIYCTRTVPEMVKCVEELKRVVNYRAECVGAEGRKILALCLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRKRAQEGASVELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGS-------------------------------YTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSVIITSGTLSPIDLYPRILDFSPVVSSSLPMSIFRSSICPLIVTRGDNMTKMSSAFGVRNDDRVISNYGKLLVDTCRIVPDGVVVFFPSYLFMEGTIVKWDELGILRQVSNYKLLFIETKDVVETTLALDNFRRACECGRGGVFLSVARGKVAEGIDFDRHLGRAVLMFGVPFQYTKSLTLKARLDFLHTRFQINEADFITFDAMRQASQCAGRVFRSKTDYGLMIFADSRYNQESKRQKLPPWIRQFLGDAHCNLSITQTASKMRRFLREMAQPVDDEARSSVLLDSSKISSLSAKLAG 801          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD)

HSP 1 Score: 995 bits (2573), Expect = 0.000e+0
Identity = 496/783 (63.35%), Postives = 605/783 (77.27%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG-ELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKVA 780
            MR+++DGL+V FPY+ +Y EQ  YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+FAHP  GKLIYCTRTVPEM KC+EELK ++ YRK   G   D + A+CLSSRRN+C+H RV+  +D EAVDG CR MTASWVR KA    G  E+C F+E Y +  SD   +P GIY++DDLKE G +KGWCPY+L R+++  A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  ISS+V  +K+ D+ARL+AEY+RLV GL  S                                          D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q  ++E KP+KF Y+RLNSL+RTLEV  L++F  L  VADFATLV TY +GF ++IEP      GV++PV++LACLDASLAIRPVFERFSSV+ITSGTLSP+DLYP+LL FNPV+R +L MS  R CICP+V+TRGSDQ+P+STKFD RDD SVVRNYG L++E+AA  PDG+VCFF SY YME I+ +WD LGVLKRVL+ KL+FIET D+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGL+I ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L  MAQP+D    +   +LD   VA
Sbjct:    1 MRVEIDGLEVLFPYERMYAEQLQYMRELKRALDAHGHCMLEMPTGTGKTVSLLSLVLAYKFAHPTAGKLIYCTRTVPEMAKCVEELKNLVAYRKKYYGERAD-LTAVCLSSRRNMCVHPRVMAHADGEAVDGQCRKMTASWVRTKAVTHPGEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGLRSS---------------------DAVVAPTYTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGTLLLEMAASCPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLQSKLLFIETTDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLIIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDDATNVNSILLDTDGVA 760          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL)

HSP 1 Score: 989 bits (2557), Expect = 0.000e+0
Identity = 496/808 (61.39%), Postives = 614/808 (75.99%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG--ELCEFFEGYSANGSDA-AMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKV----ATRNYDKTGKGEELLVKTGRG 800
            MR+++DGL+V FPY+ +Y EQ  YM ELKR+LDA GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKLIYCTRTVPEM KC+EE+K ++ YR    G +  K+ A+CLSSRRN+C+H RV+  +D EAVD  CR MTASWVR +A  G     ELC ++E Y +  SD   +P GIYS+DDLKE G  KGWCPY+L R+++ +A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  IS++V ++K+ D+ARL+AEY+RLV GL  S                                          D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q  A+E KP+KF Y+RLNSL+RTLE+  L+++  L DVADFATLV TY EGF ++IEP   V  G ++PV++LACLDASLA+RPVFERFSSV+ITSGTLSP+DLYP+LL FNPV+R +L MS  R CICPLV+TRGSDQ+P+STKFD RDD SVVRNYG L++E+A+  PDG+VCFF SY YME I+ +WD LGVLKRV++ KL+FIETKD+VETTLALDN+K+ACDCGRGAVF SVARGKVAEGIDFDRHYGR V++FG+PFQYTLSH LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLV+ ADSRYNR DKR+KLP W+ QFL +SHLN+S D AI MA+ +L  MAQP+D    +   +LD + V       +  K  + E + + +G G
Sbjct:    1 MRVEIDGLEVLFPYERMYSEQLQYMRELKRALDANGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLIYCTRTVPEMAKCVEEIKHLMAYRAKYYGDQ-HKLTAVCLSSRRNMCVHPRVMAHADGEAVDAQCRKMTASWVRARANTGEHQDVELCSYYENYESRKSDENVLPPGIYSVDDLKELGIGKGWCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGLRSSSA---------------------VVAPTYVNPANQQAIDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDGV-SGAHDPVLQLACLDASLAMRPVFERFSSVIITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMASSCPDGMVCFFPSYLYMEKIIGQWDALGVLKRVVQHKLLFIETKDIVETTLALDNYKKACDCGRGAVFFSVARGKVAEGIDFDRHYGRCVILFGIPFQYTLSHKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVLFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAIFMAKKYLALMAQPVDEYTNVNSILLDTEGVQQWLGRHSIAKDKEDEPMPIASGNG 785          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: H3G8C6_PHYRM (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8C6_PHYRM)

HSP 1 Score: 988 bits (2554), Expect = 0.000e+0
Identity = 489/771 (63.42%), Postives = 601/771 (77.95%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA-----EAGGGGELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLD 765
            M++D+DGL+V FPY+ +Y EQ  YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKL+YCTRTVPEM KC+EE+K+++ YR+  LG E  ++ A+CLSSRRN+C+H RV+  +D E VDG CR MTASWVR KA     EA    E C F+E Y A  SD   +P G+YS+DDLK+ G +KGWCPY+L R+++  A+V+VYNYQYMLDPKV+ +VSR  E ES++VFDEAHNIDNVC EALSVDLD+RSLD ASR L  +SS+V +LK+ D+A+L+AEY+RLV GL  S                                          D + ANPVLP D+L EA+PGNIRRAEHF++FMR+++E+ + R+RV+ VESETP AFLH + Q  ++E KP+KF Y+RLNSLLRTLEV  L+++  L DVADFATLV TY +GF ++IEP  S   GV++PV++L+CLDASLAIRPVFERFSSVVITSGTLSP+DLYP+LL FNPV+R +L MS  R  ICPLV+TRGSDQ+P+STKFD RDD SVVRNYG L++E+AA  PDG+VCFF SY YME I+ +WD LGVLKRVL  KL+FIETKD+VETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLVI ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L  MAQP+D
Sbjct:    1 MKVDIDGLEVLFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKHAHPTAGKLVYCTRTVPEMAKCVEEIKKLVAYRQQHLG-ERAQLTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRAKAAKAREEAAADVETCSFYEKYDARKSDDTVLPPGVYSVDDLKDLGVQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIIVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVSKLKQADKAKLDAEYRRLVEGLRSS----------------------------------DAVVAPTHDIMIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAISMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLADVADFATLVATYADGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVD 735          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: B8C2D9_THAPS (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2D9_THAPS)

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 499/793 (62.93%), Postives = 610/793 (76.92%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGGGG------ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQS-----VESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEG---FAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPLRLKGTMLDAQKV 779
            MR +L+GLDVFFPYD +Y EQY YM  LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P  GKL+YCTRTVPEM   +EEL  V+ YR +QLGA G  VLALCLSSRRN+CIHERV+ ESDRE +D ACR MTA W  +KA+           E CE+++G+ + G   +MP+G+Y L++L+++G+ K WCPYYL R  I+HA+VLV+NYQYMLDPKVA MVS+ELE+ES++VFDEAHNID+VC EALSVD+ +R+L+ A+R LG++SS+V  +K +D ARL AEYQ LV+GL + GL                                       A  + +N VL  D++ EAVPGNIRRAEHFI+FM+K+VEH KTR+R  S     V SETPLAFLHRM   T+LE KPLKFAYSRL+SLLRTL+V  LDDF  L DVADFA+LV TY EG   FA+++EP GS +PG  +PV++LACLDASLAI P+F+RF SVVITSGTLSP+DLYPKLL F P V  + +MST R CI PLV+TRGSDQLP+STKFD RDD  VVRNYG++++EL + +PDGVV FFTSYSYME I+S+WD +G+L+++ + KL+FIETKDVVETTLALDN++RACD GRGAVFLSVARGKV+EGI+FDRHYGRAV+MFGVPFQYTLSH+LRARLEYL+  +QIRE DFL FDA+RQ +QC+GRVIRSK DYGL+I ADSRYNRHDKRSKLP W+LQFL +  LN+S D AIA  + FL+ MAQP+D   LK  +L   +V
Sbjct:    1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGL---------------------------------LDAPAAAVGLSSN-VLSPDVINEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLLTLDEV 758          
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Match: A0A5D6XMP7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMP7_9STRA)

HSP 1 Score: 979 bits (2530), Expect = 0.000e+0
Identity = 490/784 (62.50%), Postives = 603/784 (76.91%), Query Frame = 0
Query:    1 MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAEGDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKA--EAGGGGELCEFFEGY-SANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIHHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRASGGVGGTAGTAGAXXXXXXXXXXXXXXXXXXXXXXXADSIPANPVLPADILQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQVTALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPLDLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDPSVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEKKLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCIGRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAIAMARMFLKDMAQPLDPL-RLKGTMLDAQKVA 780
            MR+D+DGL+V FPY+ +Y EQ  YM ELKR+LDA+GHC+LEMPTGTGKTV L+SL+ ++++AHP  GKL+YCTRTVPEM KC+EELKR++ YR+   G E  ++ A+CLSSRRN+C+H RV+  +D EAVD  CR +TASWVR +A  +     E C F+E Y S  G +A +P G+Y++DDLK  G ++GWCPY+L R+ +  A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  IS+ V  +K+ D ARL+AEY+RLV GL  S                                          D + ANPVLP D+L EA+PGNIRRAEHFI+FMR+++E+ +TR+RV++VESETP AFLH + Q  A++ KP+KF Y+RLNSLLRTLEV  L++F  L  VADFATLV TY +GF ++IEP      GV++PV++LACLDASLAIRPVFERF+SVVITSGTLSP+DLYP+LL F+PVVR +L MS  R CICP+V+TRGSDQ+P+STKFD RDD SVVRNYG+L++ELAA  PDG+VCFF SY YM  I+ +WD LGVLKRVL+ KL+FIET DVVETTLALDN+K+ACDCGRGA+F SVARGKVAEGIDFDRHYGRAV++FG+PFQYTLS+ LRARLEYLR T QIREGDFLTFDA+RQ AQC GRV+RSKTDYGLVI ADSRYNR DKR+KLP W+ QFL +SHLN+S D A+ MA+ +L  MAQP D    +   +LD+  VA
Sbjct:    1 MRVDIDGLEVLFPYERMYAEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAFKYAHPTAGKLVYCTRTVPEMAKCVEELKRLVAYREKYYG-ERARLTAVCLSSRRNMCVHPRVMAHADGEAVDSQCRQLTASWVRARAAQQPESSVETCSFYEKYESRKGDEAVLPPGVYAVDDLKALGAQRGWCPYFLTRYAVSFADVIVYNYQYMLDPKVSAMVSRTFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAHVARVKQADTARLDAEYRRLVEGLRSS----------------------DAVVAPTYMGAADRPIDTANDLLLANPVLPDDVLAEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLHQAIAMDAKPMKFCYTRLNSLLRTLEVTNLEEFNSLTAVADFATLVATYADGFMLIIEPFDGT-SGVHDPVLQLACLDASLAIRPVFERFASVVITSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPMVITRGSDQMPVSTKFDLRDDMSVVRNYGSLLLELAASCPDGMVCFFPSYLYMAKIIGQWDALGVLKRVLQSKLLFIETTDVVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNKLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRLDKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLALMAQPPDEAANVNSILLDSDGVA 760          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN2_ECTSI0.000e+094.74General transcription and DNA repair factor IIH he... [more]
A0A836CJZ4_9STRA0.000e+070.67General transcription and DNA repair factor IIH he... [more]
K8YZX4_NANGC0.000e+067.90General transcription and DNA repair factor IIH he... [more]
A0A7S2D9H7_9STRA0.000e+065.63General transcription and DNA repair factor IIH he... [more]
A0A7R9U4D1_9STRA0.000e+062.44General transcription and DNA repair factor IIH he... [more]
K3WFP6_GLOUD0.000e+063.35General transcription and DNA repair factor IIH he... [more]
A0A8K1FGF4_PYTOL0.000e+061.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G8C6_PHYRM0.000e+063.42General transcription and DNA repair factor IIH he... [more]
B8C2D9_THAPS0.000e+062.93General transcription and DNA repair factor IIH he... [more]
A0A5D6XMP7_9STRA0.000e+062.50General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001945RAD3/XPD familyPRINTSPR00852XRODRMPGMNTDcoord: 408..430
score: 54.66
coord: 743..763
score: 46.26
coord: 439..457
score: 63.16
coord: 672..694
score: 77.02
coord: 528..545
score: 52.38
coord: 8..25
score: 66.67
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 1..779
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488deadxpdcoord: 8..280
e-value: 2.5E-110
score: 382.5
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491Cxpdneu3coord: 578..722
e-value: 1.7E-66
score: 236.9
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 560..733
e-value: 1.4E-43
score: 149.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 17..288
e-value: 4.2E-51
score: 175.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 537..736
e-value: 2.0E-52
score: 179.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 32..716
IPR010614DEAD2PFAMPF06733DEAD_2coord: 71..256
e-value: 6.7E-49
score: 165.9
IPR010643Helical and beta-bridge domainPFAMPF06777HBBcoord: 335..449
e-value: 3.9E-23
score: 82.1
IPR013020ATP-dependent helicase Rad3/Chl1-likeTIGRFAMTIGR00604TIGR00604coord: 338..744
e-value: 3.3E-144
score: 480.1
coord: 9..297
e-value: 1.4E-87
score: 292.9
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..779
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 229..238
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 7..283
score: 35.892109
NoneNo IPR availableCDDcd18788SF2_C_XPDcoord: 525..720
e-value: 5.16138E-67
score: 217.472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig198contigP-littoralis_Contig198:303041..326135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig198.60.1mRNA_P-littoralis_Contig198.60.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig198 303041..326544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig198.60.1 ID=prot_P-littoralis_Contig198.60.1|Name=mRNA_P-littoralis_Contig198.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=813bp
MRLDLDGLDVFFPYDFLYPEQYDYMLELKRSLDAKGHCLLEMPTGTGKTV
CLISLITSYQFAHPEVGKLIYCTRTVPEMMKCIEELKRVIGYRKDQLGAE
GDKVLALCLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGG
GGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGREKGWCPYYLARHIIH
HANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVD
LDKRSLDAASRCLGKISSKVVELKKTDQARLNAEYQRLVSGLAESGLGRA
SGGVGGTAGTAGAGAGAGAGAGAGVVAGAAGAAAAAADSIPANPVLPADI
LQEAVPGNIRRAEHFISFMRKVVEHFKTRVRVQSVESETPLAFLHRMQQV
TALERKPLKFAYSRLNSLLRTLEVAGLDDFRPLVDVADFATLVGTYTEGF
AVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFSSVVITSGTLSPL
DLYPKLLGFNPVVRTALSMSTVRKCICPLVVTRGSDQLPMSTKFDQRDDP
SVVRNYGALIIELAAIVPDGVVCFFTSYSYMEMIVSKWDELGVLKRVLEK
KLIFIETKDVVETTLALDNFKRACDCGRGAVFLSVARGKVAEGIDFDRHY
GRAVVMFGVPFQYTLSHVLRARLEYLRATFQIREGDFLTFDAIRQCAQCI
GRVIRSKTDYGLVILADSRYNRHDKRSKLPGWVLQFLEESHLNMSADNAI
AMARMFLKDMAQPLDPLRLKGTMLDAQKVATRNYDKTGKGEELLVKTGRG
GGGGGGGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001945RAD3/XPD
IPR006554Helicase-like_DEXD_c2
IPR006555ATP-dep_Helicase_C
IPR027417P-loop_NTPase
IPR010614DEAD_2
IPR010643HBB
IPR013020Rad3/Chl1-like
IPR045028DinG/Rad3-like
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3