prot_P-littoralis_Contig198.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig198.24.1
Unique Nameprot_P-littoralis_Contig198.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length80
Homology
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BLAST of mRNA_P-littoralis_Contig198.24.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 6.930e-23
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0 
Query:    1 MDEVMARQQSRAQSGDNVNYVLARTVRSNLQYNAAIEIGARGGGNQCQRGACFKQAVDMFSGLKMEGVPRAVVLALLRH 79
            +  V+ RQ+ R   GDNV+YVLARTVR  LQY AA EIGA G GNQC+RG CF +A+ MF G  MEG+PR VVLALLR+
Sbjct:  145 IQHVLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_P-littoralis_Contig198.24.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.360e-11
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0 
Query:    1 MDEVMARQQSRAQSGDNVNYVLARTVRSNLQYNAAIEIGARGGGNQCQRG 50
            +  V+ RQ++R   GDNV YVLARTVRSNLQY AA EIGA G GNQC+RG
Sbjct:  112 IQHVLDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRG 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE6.930e-2363.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI2.360e-1168.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig198contigP-littoralis_Contig198:128894..130048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig198.24.1mRNA_P-littoralis_Contig198.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig198 128704..130206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig198.24.1 ID=prot_P-littoralis_Contig198.24.1|Name=mRNA_P-littoralis_Contig198.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=80bp
MDEVMARQQSRAQSGDNVNYVLARTVRSNLQYNAAIEIGARGGGNQCQRG
ACFKQAVDMFSGLKMEGVPRAVVLALLRH*
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