prot_P-littoralis_Contig197.53.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig197.53.3
Unique Nameprot_P-littoralis_Contig197.53.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length177
Homology
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BLAST of mRNA_P-littoralis_Contig197.53.3 vs. uniprot
Match: D8LKZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ0_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.670e-14
Identity = 63/173 (36.42%), Postives = 78/173 (45.09%), Query Frame = 0 
Query:   37 DTVPYDIHQRWKQCSTGVR-------APSERPVLPRHVGRARAEVKAPRQPLRRRVCGPWLHRPPDDERGSRGQPESN----------FLTWKSVRRAPSV-------VSYNWAELVPEAANLLREHGHPEMASILDNITEGCRKVIHSR---------DSFSAKVPSTGLHP 176
            +TVP    + WKQ   G R       A S RP   R +G A                 P     PDDE+G+RG  +S           +  W +      +        S + A LVP+AAN+LRE GHPEMA ILDN TEG RKVIHSR         + FSAK+ + GL P
Sbjct:   38 NTVPLSTREGWKQYR-GTRTFPESRIAASCRPGPTRGLGAAXXXXXXXXXXSE---VDPGYTNHPDDEKGNRGPTKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREIFSAKLRNIGLDP 206
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BLAST of mRNA_P-littoralis_Contig197.53.3 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 3.620e-14
Identity = 57/166 (34.34%), Postives = 72/166 (43.37%), Query Frame = 0 
Query:   37 DTVPYDIHQRWKQCSTGVRAPSERPVLPRHVGRARAEVKAPRQPLRRRVCGPWLHRPPDDERGSRGQPESN----------FLTWKSVRRAPSV-------VSYNWAELVPEAANLLREHGHPEMASILDNITEGCRKVIHSR---------DSFSAKVPSTGLHP 176
            +TVP    + WKQ       P  R       G  R    A           P     PDDE+G+RG   S           +  W +      +        S + A LVP+AAN+LR+ GHPEMA+ILDN TEG RKVI SR         + FSAK+ + GL P
Sbjct:    9 NTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGHGAAXXXXXXXSEVDPGHTNHPDDEKGNRGPTNSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLRDQGHPEMATILDNTTEGARKVIRSRVLAKYLKNREVFSAKLRNIGLDP 174
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.53.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKZ0_ECTSI2.670e-1436.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L718_9PHAE3.620e-1434.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:228734..230949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.53.3mRNA_P-littoralis_Contig197.53.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig197 225658..231012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig197.53.3 ID=prot_P-littoralis_Contig197.53.3|Name=mRNA_P-littoralis_Contig197.53.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MKNSGQQLILWTKKGRAIWQISWIESRHTTGANNVHDTVPYDIHQRWKQC
STGVRAPSERPVLPRHVGRARAEVKAPRQPLRRRVCGPWLHRPPDDERGS
RGQPESNFLTWKSVRRAPSVVSYNWAELVPEAANLLREHGHPEMASILDN
ITEGCRKVIHSRDSFSAKVPSTGLHP*
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