prot_P-littoralis_Contig197.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig197.16.1
Unique Nameprot_P-littoralis_Contig197.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length149
Homology
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BLAST of mRNA_P-littoralis_Contig197.16.1 vs. uniprot
Match: D8LKX9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX9_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.300e-26
Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 0 
Query:   25 RLEDRRRAVSMSFAEEYRR-----GRPSRQASALQKQCVDCHLSPSFAMEGEPAIYCRAHQLEGMVNVLREACTQAGCQRT 100
            RLEDRRR VSMS  E +R       R +RQASA+ K+C+DC+L PSFAMEGEPAI+CRAHQ+EGMVNVLRE CT  GC RT
Sbjct:  107 RLEDRRRTVSMSITEGHRYDGGGGSRSARQASAVNKRCLDCNLPPSFAMEGEPAIFCRAHQMEGMVNVLREGCTTQGCCRT 187
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKX9_ECTSI1.300e-2667.90EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX9... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 71..133
e-value: 5.4E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 57..87
e-value: 5.0E-5
score: 23.8
coord: 92..124
e-value: 1.4E-4
score: 22.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:113533..115691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.16.1mRNA_P-littoralis_Contig197.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig197 111713..117055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig197.16.1 ID=prot_P-littoralis_Contig197.16.1|Name=mRNA_P-littoralis_Contig197.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=149bp
MYLPAWEEEEDAEGGAAITSSGPSRLEDRRRAVSMSFAEEYRRGRPSRQA
SALQKQCVDCHLSPSFAMEGEPAIYCRAHQLEGMVNVLREACTQAGCQRT
ASYGFPGEGRQRCFSHMEEGMAHVLEASTTTEVPSAHKERGTTRRMSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys