prot_P-littoralis_Contig196.68.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig196.68.2
Unique Name	prot_P-littoralis_Contig196.68.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	324

Homology

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: D7G880_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G880_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 4.740e-77
Identity = 277/297 (93.27%), Postives = 284/297 (95.62%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDNAITNFPQSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRPDASTGKLDPDSVGSPRKVEVVIRGNPVADPKRANG 297
            MFVKKD RKIPDILAD+ DEREELHLGRRSSEFVSNGIKVVCSSRH PRLQKLQKLSLYDNMLS +KGIG LSATPLKHLNLGRNQL SLPPELGKVGTLETLWVDDNAIT+FP+SVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGR D  TGKLDP +V SPRK EVVIRGNP+ADPK+A G
Sbjct:    1 MFVKKDTRKIPDILADEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPIADPKQAGG 297

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A835YNM3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.490e-36
Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLS--ATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDNAITNFPQSVLQLKR 122
            MF+KKD+RKI +ILAD  D REEL LGRRS EF   G++V+CS  + P L +L+ LS+YDN+L+ I+G+G L   AT L HLNLGRNQL +LP ELG V TLETLW+DDN +  FP  V +L R
Sbjct:    1 MFIKKDLRKINEILADREDSREELRLGRRSGEF-KGGLRVICSPHNIPALAQLRSLSVYDNLLTSIEGVGLLGNGATALLHLNLGRNQLRTLPQELGLVSTLETLWLDDNLLDEFPLPVTELTR 123

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: W4FL85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL85_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.650e-28
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWV 105
            MFV KD+RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN LS I GIG LS+TPL  L+LG+NQL  LP E+G +  L+ LW+
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEIGSLRHLKELWL 104

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A1V9YVQ5_9STRA (Membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVQ5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.900e-28
Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDNAITNFPQSVLQL 120
            MFV KD+RKIP I+ D+ D REEL LGRRS+EF  + +KV+CS  + P    L++LSLYDN L  +  IG L+ +PL+ L++G N L SLP E+G +  LE LWV +NA+ + P+S+L+L
Sbjct:    1 MFVVKDLRKIPVIMLDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLQSVDRIGILANSPLQVLDIGYNLLTSLPTEIGTLKNLEELWVTNNALESIPESILEL 119

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A6G0WAD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.660e-28
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDNAITNFPQSVL 118
            MFV KD+RKIPDI+ DDND RE+L LGRR++EF  + + ++C+  +     KLQKLSLYDN L  I+ IG L+ TPL  L+LG+NQL SLP E+G +  L+ LWV +N +    ++VL
Sbjct:    1 MFVVKDLRKIPDIVRDDNDTREQLRLGRRAAEFQGD-LSILCTPSNVAAFSKLQKLSLYDNNLHSIERIGLLAETPLAILDLGQNQLESLPDEMGTLVHLKELWVTNNKLMTISEAVL 117

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: W4FJA0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJA0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.570e-27
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPE-------------------------LGKVGTLETLWVDDNAITNFPQSVLQLKRL 123
            MFV KD+RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN LS I GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +T+ P SVL L  L
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 147

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A067CJY8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJY8_SAPPC)

HSP 1 Score: 117 bits (293), Expect = 4.060e-27
Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDN 108
            MFV+KD+RKIP I+ D+ND REEL LGRRS+EF+ N +KV+CS  + P    L++LSLYDN L  +  IG L+ TPL  L+LG N L SLP E+G +  LE LWV +N
Sbjct:    1 MFVQKDLRKIPAIMVDENDTREELRLGRRSAEFLGN-LKVLCSLDNLPAFGNLRRLSLYDNQLHSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A485L9Z5_9STRA (Aste57867_17909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.150e-27
Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDD 107
            MFV KD+RKIP+IL D  DERE++ LGRRS+EF  N + V+C+  +   L KLQKLSLYDN L  I+ IG LS TPL  L+LG+NQL  LP E+G + TL+ LWV +
Sbjct:    1 MFVVKDLRKIPEILQDPEDEREQMRLGRRSAEFSGN-LDVLCTPSNVTALTKLQKLSLYDNQLVSIERIGLLSKTPLCILDLGQNQLERLPDEIGSITTLKELWVSN 106

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A3R7BQF1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BQF1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.080e-25
Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPE-------------------------LGKVGTLETLWVDDNAITNFPQSVLQLKRL 123
            MFV KD+RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN L+ I GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +T+ P SVL L  L
Sbjct:  358 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLTSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 504

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BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Match: A0A1V9YE43_9STRA (Leucine rich repeat protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YE43_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.580e-24
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 0

Query:    1 MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTLETLWVDDN 108
            MFV KD+RKIP I+ D+ D REEL LGRRS+EF  + +KV+CS  + P    L++LSLYDN L  +  IG L+ TPL  L+LG N L SLP E+G +  LE LWV +N
Sbjct:    1 MFVVKDLRKIPAIMVDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLRSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig196.68.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
D7G880_ECTSI	4.740e-77	93.27	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A835YNM3_9STRA	1.490e-36	58.87	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]
W4FL85_9STRA	2.650e-28	56.19	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A1V9YVQ5_9STRA	3.900e-28	50.83	Membrane protein n=1 Tax=Thraustotheca clavata Tax...	[more]
A0A6G0WAD8_9STRA	5.660e-28	51.69	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
W4FJA0_9STRA	2.570e-27	45.27	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A067CJY8_SAPPC	4.060e-27	55.56	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A485L9Z5_9STRA	4.150e-27	57.01	Aste57867_17909 protein n=1 Tax=Aphanomyces stella...	[more]
A0A3R7BQF1_9STRA	1.080e-25	44.59	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]
A0A1V9YE43_9STRA	1.580e-24	53.70	Leucine rich repeat protein n=1 Tax=Achlya hypogyn...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 50..72 e-value: 50.0 score: 7.5 coord: 166..188 e-value: 7.8 score: 14.1 coord: 235..258 e-value: 190.0 score: 2.7 coord: 143..165 e-value: 16.0 score: 11.6 coord: 77..97 e-value: 43.0 score: 8.1 coord: 120..142 e-value: 0.31 score: 20.1 coord: 189..212 e-value: 8.8 score: 13.7
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 212..231 e-value: 41.0 score: 9.0 coord: 166..185 e-value: 68.0 score: 7.4 coord: 120..139 e-value: 50.0 score: 8.3 coord: 97..116 e-value: 83.0 score: 6.7 coord: 77..94 e-value: 440.0 score: 1.2 coord: 143..162 e-value: 410.0 score: 1.4 coord: 189..208 e-value: 29.0 score: 10.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..323
None	No IPR available	PANTHER	PTHR48051:SF13	LEUCINE-RICH REPEAT-CONTAINING 30A	coord: 143..255
None	No IPR available	PANTHER	PTHR48051:SF13	LEUCINE-RICH REPEAT-CONTAINING 30A	coord: 111..217
None	No IPR available	PANTHER	PTHR48051	FAMILY NOT NAMED	coord: 111..217
None	No IPR available	PANTHER	PTHR48051	FAMILY NOT NAMED	coord: 143..255
None	No IPR available	PANTHER	PTHR48051	FAMILY NOT NAMED	coord: 49..162
None	No IPR available	PANTHER	PTHR48051:SF13	LEUCINE-RICH REPEAT-CONTAINING 30A	coord: 49..162
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 47..252
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 7..259 e-value: 1.0E-49 score: 170.8
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 77..93 e-value: 0.48 score: 11.2
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 122..179 e-value: 5.1E-11 score: 42.2
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 122..143 score: 7.465533
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 52..73 score: 7.126702

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig196	contig	P-littoralis_Contig196:268303..275117 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig196.68.2	mRNA_P-littoralis_Contig196.68.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig196 267359..275199 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig196.68.2 ID=prot_P-littoralis_Contig196.68.2|Name=mRNA_P-littoralis_Contig196.68.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp
MFVKKDIRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRL
QKLQKLSLYDNMLSGIKGIGTLSATPLKHLNLGRNQLGSLPPELGKVGTL
ETLWVDDNAITNFPQSVLQLKRLQELRLSGNRISEVPEDIAALSDLRVLA
LDNNEIKTVPKAIGKLSQLRFLLLRQNELEELPDEVGDLFDLRTLGISSN
RLVSLPASLGRAVLLEFLFANCNRLHSLPAELAGLMNLKKANLANNSIFT
LPVDVEAAWGRPDASTGKLDPDSVGSPRKVEVVIRGNPVADPKRANGGGS
GSGSGSGNSEDTGQAAAAMDETQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt