prot_P-littoralis_Contig196.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig196.29.1
Unique Nameprot_P-littoralis_Contig196.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length139
Homology
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 4.320e-49
Identity = 106/138 (76.81%), Postives = 116/138 (84.06%), Query Frame = 0
Query:    1 MPRSRRSAPARRPXXXXXXXXXXXXAQPPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENAQEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQLEAKKTYN 138
            M RSRRSAPARRPXXXXXXXXXXXX         SGGGGMLAGMASTMAQGFAFGTGSSIAHRAVG+++GGGGS +   +A+  Q P  +QQ   DPCD+DKQNFGQCLQNNNNDVTACQFVFEALQTCQ+EAKK+YN
Sbjct:    1 MGRSRRSAPARRPXXXXXXXXXXXXXXX-XXXXXSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGAVMGGGGSSAPVEQAQE-QAPQAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSYN 136          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.050e-23
Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    6 RSAPARRPXXXXXXXXXXXXAQPPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVG--GGGSGSSEPEAENAQEPSTHQQ-LQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            RS PARRP            A  PA  Q+S GGGM++G+AST+AQG AFGTGS+IAHRAVG++ G  GG  G +E  A+ +Q+    QQ   +  C  DKQ F +CLQ N  D ++CQF+++AL+TCQ
Sbjct:   15 RSVPARRP------------ASTPAPAQQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQ 130          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A7R9VMR5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMR5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.760e-22
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0
Query:   28 PPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGG-GGSGSSEPE-----AENAQEPSTHQQLQ--SDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            PPAQQ  SGGGGM++G+ ST+AQG AFGTGS+IAHRAVG++ G  GG G   P+     A  A      QQ+Q  + PCD DKQ F +CLQ N  D  +C+F+++ LQTCQ
Sbjct:   38 PPAQQ--SGGGGMMSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGGEEAPQDSVAGAAPADAYGQQQQMQQMAGPCDQDKQMFFECLQMNKGDQESCRFLYDTLQTCQ 146          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.420e-21
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 0
Query:   28 PPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENA--QEPSTHQQLQSD------PCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQLEAK 134
            PPA  Q   GGGM++G AST+AQGFAFGTGS++AHRAVG+  G     S  P  + A  Q+P+  QQ  +       PC +D QNF  CLQ N  +V AC F++E+LQ CQ +A+
Sbjct:   34 PPAPHQPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQPAHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQRQAQ 148          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A7S1XNA6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNA6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.280e-20
Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 0
Query:   26 AQPPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGG-GGSGSSEPEAENAQEPSTHQQ-----LQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            AQ PAQ Q+  GG M++G+  T+AQGFAFGTGS++AHRAVG++     GSG   P A   Q+P   QQ     +  + C +D+QNF QCL  NN +  ACQF F++LQ CQ
Sbjct:   46 AQVPAQPQQQSGG-MMSGLLGTVAQGFAFGTGSAVAHRAVGAVANSFSGSGEQAPAAGMEQQPQFQQQAPIQQVSQNACSVDQQNFMQCLTENNGNAQACQFFFDSLQQCQ 155          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A7S1UZU7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZU7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.350e-20
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   26 AQPPAQQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGG---GGSGSSEPEAE---NAQEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQL-EAKKTYN 138
            A PPA  Q+S GGG+L+G+ ST+AQG AFGTGS+IAHRAVG++ GG   GG G      E   ++  P +  Q  S  C  DKQ F +CLQ N  D  +C F+++ LQTCQ  E   ++N
Sbjct:   12 AAPPAVPQQSSGGGLLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGGLSGGGEGGEAAPVEQYGDSLNPGSPTQQLSGACAGDKQMFFECLQVNKGDQQSCSFLYDQLQTCQRNETSMSFN 131          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: H3G8I8_PHYRM (CHCH domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3G8I8_PHYRM)

HSP 1 Score: 89.7 bits (221), Expect = 4.160e-20
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 0
Query:    1 MPRSRRSAPARRPXXXXXXXXXXXXAQPPAQQQKSG-----------GGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENA----QEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQLEAKKTY 137
            M RSR S PA RP               PA  +              GGGM++G+  T+AQG AFGTGS+IAHRAVG++ G    GS  P+ + A    Q+  T Q  Q + C  D+++F +CL NN+ND+++CQF  +  + CQ++ + T+
Sbjct:    1 MGRSRSSRPAARPAPRRAPAPAQPRRSAPAPARTQAAPXXXXXXXXSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSFSGGSDAPQEQEAAPAAQDHQTAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQMQQQSTF 152          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A1Z5K887_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K887_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 9.090e-20
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   33 QKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENAQEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            Q S GGGML+G+ ST+AQG AFGTGS+IAHRAVG++ G  G GS+E  A   Q     QQ Q   C MDKQ F  CLQ N  D  +C+F+++ LQ CQ
Sbjct:   42 QPSSGGGMLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGSNEVAAAVEQ---PMQQQQGGVCAMDKQMFFDCLQQNKGDQESCRFLYDQLQQCQ 136          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A7S1E0N2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0N2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.060e-19
Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 0
Query:   31 QQQKSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVG---GGGSGSSEPEAENAQEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 130
            +QQ S GGGML+G+ ST+AQG AFGTGS+IAH+AVG++ G   GGG+  +E +    Q  +  QQ     C  DKQ F +CLQ N  D  AC F++E LQ CQ
Sbjct:   37 RQQASSGGGMLSGIGSTIAQGMAFGTGSAIAHQAVGAVAGSLSGGGAAPAEQQYNETQPMAQQQQPIQGSCAQDKQMFFECLQVNKGDQQACSFLYENLQACQ 139          
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Match: A0A421EVM3_9STRA (CHCH domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EVM3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.170e-18
Identity = 46/107 (42.99%), Postives = 71/107 (66.36%), Query Frame = 0
Query:   35 SGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENA----QEPSTHQQLQSDPCDMDKQNFGQCLQNNNNDVTACQFVFEALQTCQLEAKKTY 137
            S GGGM++G+  T+AQG AFGTGS+IAHRAVG++ G    GS  P+ + A    Q+    Q  Q + C  D+++F +CL NN+ND+++CQF  +  + CQL+ + ++
Sbjct:   41 SSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMSGGSDAPQQQEAAPAQQDYQAAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQLQQQSSF 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ0_ECTSI4.320e-4976.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2PCQ3_9STRA2.050e-2349.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9VMR5_9STRA4.760e-2253.15Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A4D9CYI4_9STRA2.420e-2148.70Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XNA6_9STRA1.280e-2049.55Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UZU7_9STRA2.350e-2047.50Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
H3G8I8_PHYRM4.160e-2037.50CHCH domain-containing protein n=12 Tax=Phytophtho... [more]
A0A1Z5K887_FISSO9.090e-2054.08Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1E0N2_9STRA2.060e-1950.49Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A421EVM3_9STRA1.170e-1842.99CHCH domain-containing protein n=2 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..104
NoneNo IPR availablePANTHERPTHR13523:SF2COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2, ISOFORM A-RELATEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..133
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 95..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig196contigP-littoralis_Contig196:153499..157261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig196.29.1mRNA_P-littoralis_Contig196.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig196 153499..157261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig196.29.1 ID=prot_P-littoralis_Contig196.29.1|Name=mRNA_P-littoralis_Contig196.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp
MPRSRRSAPARRPAPRSAPPARSAPAQPPAQQQKSGGGGMLAGMASTMAQ
GFAFGTGSSIAHRAVGSIVGGGGSGSSEPEAENAQEPSTHQQLQSDPCDM
DKQNFGQCLQNNNNDVTACQFVFEALQTCQLEAKKTYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF