prot_P-littoralis_Contig196.1.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig196.1.2
Unique Nameprot_P-littoralis_Contig196.1.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length388
Homology
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BLAST of mRNA_P-littoralis_Contig196.1.2 vs. uniprot
Match: D7G5U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U8_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 9.760e-11
Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:  158 LQDKNFEMSPLVTTALTVLRNESNTEDWLTLSQHLNALVRKSFTLGILADRELLDQLQFHG-DIIEEGGHPTAVLRVFSEMLPNKRHVA 245
            L  K  +M+PL TTALT LR E   EDW +   H++A++ K  TLG++  R +LD   + G D++ + G P  V  +F++++PN R+++
Sbjct:  174 LLSKTTQMNPLPTTALTPLRTEKGKEDWYSFKPHVDAIIAKGVTLGLMTWRSMLDDFVYRGNDMLLQFGVPEKVFGIFTDLMPNARNIS 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5U8_ECTSI9.760e-1138.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig196contigP-littoralis_Contig196:3412..6935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig196.1.2mRNA_P-littoralis_Contig196.1.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig196 3361..7510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig196.1.2 ID=prot_P-littoralis_Contig196.1.2|Name=mRNA_P-littoralis_Contig196.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=388bp
MKLEPLVTHVQPLGGGVPSFYQASAQASDIDSGVSGEGAAQFRARLAKSV
VAVRRSFGPFHRTAEGVGQVRFPPDRGGNPTRAGGHQRSAASAAPPKPLP
APTAPAAPAGASAGASADAGVDLLVARLQTLLALPATETAGADVLAPEDQ
RVVNYFSLQDKNFEMSPLVTTALTVLRNESNTEDWLTLSQHLNALVRKSF
TLGILADRELLDQLQFHGDIIEEGGHPTAVLRVFSEMLPNKRHVAGDHLS
GPRKTPRRQEAPQRVNRSVRSSARISWSVPFSRHHAARVAASSTAPQPRG
RGSSVRGGGGRYSSAGASVSLPFTLSTLPPAATGRRAAHQGGSTRGNGRG
ASAPPPPPTEKVHGQTPGEPAGHELFAQRRLLPQLRR*
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