prot_P-littoralis_Contig195.58.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.58.5
Unique Nameprot_P-littoralis_Contig195.58.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length257
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.58.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 88..101
score: 50.94
coord: 67..80
score: 48.34
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 88..103
e-value: 110.0
score: 7.1
coord: 190..205
e-value: 260.0
score: 4.0
coord: 142..168
e-value: 35.0
score: 11.1
coord: 64..79
e-value: 79.0
score: 8.3
NoneNo IPR availablePANTHERPTHR48004OS01G0149700 PROTEINcoord: 126..256
coord: 51..173
coord: 1..120
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 3..256
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 10..34
e-value: 12.0
score: 12.6
coord: 190..214
e-value: 0.75
score: 18.8
coord: 64..87
e-value: 31.0
score: 9.2
coord: 142..166
e-value: 11.0
score: 13.0
coord: 88..112
e-value: 3.0
score: 16.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 140..179
e-value: 1.1E-8
score: 34.7
coord: 63..101
e-value: 6.2E-8
score: 32.3
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 193..213
e-value: 0.17
score: 12.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..257
e-value: 1.1E-80
score: 273.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:299515..330430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.58.5mRNA_P-littoralis_Contig195.58.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 299515..330430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.58.5 ID=prot_P-littoralis_Contig195.58.5|Name=mRNA_P-littoralis_Contig195.58.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=257bp
GPLPPELGQLGAMEVLDLSENKLSGAIPPELGELRALKVLSLRGRDYYEE
VGLSGAIPKELGKLTALEQLDLSNNKIDGAIPKELGKLTALEQLDLSYNK
IDGAIPPELGELRALKVLLLRGRDDFGGGGLSGAIPKELGNLTALERLDL
SRNKIDGAIPKELVNLAALEQLNLSYNKIDGAIPKELGKLTALEHLDLSR
NNIDGAIPPELGELRALKVLLVRGDDLEGGGLSGAIPKELGNLTALEQLD
LSRNNID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf