prot_P-littoralis_Contig194.102.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig194.102.1
Unique Nameprot_P-littoralis_Contig194.102.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length305
Homology
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BLAST of mRNA_P-littoralis_Contig194.102.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 2.640e-94
Identity = 186/287 (64.81%), Postives = 211/287 (73.52%), Query Frame = 0 
Query:   23 SMPLPTRGAFLEANLPWGKRRRISGNLRWKM---GQRTRKV--------------FCAAEGRELVVYDLEDDSNAGLPPRARYLVMGVRSVKTGPNAMELDVTVADESELVTLGWPSNAGAAPGLPFIETRSVTLTAAGRHEHARWELALEEAQSWTECKEREALMEELELSLPFRETAFDHVQRCLPDATIENMLGVSAAKNNPGCVLKSMVFDAAEAAASA------GPLSSPELTGSAGPGLGFSRHASYSGXXXXXXXXXXXAWKLSGAPSSSFRGLLSIFDS 286
            + P P +G FLEA+LPWGKRRR+SGNLR K+   G+  R+V              FCAAEGRELVVYD E DSNAGLPPRARYLVMGVR++KTGPNA EL+VTVADESE+ +LGW   A   PG+ F+ETRSVTLTA+GRHEHARW LALEEAQSWTE KEREAL+EELELSLPFRE A +HV   LPD+TIE++LGVS A  NPGCVLKS+VFDAAEAAASA      GPLSSPELT  +                 XXXXXXXX  KL+ APS+S RGL S F+S
Sbjct:  350 ARPTPPQGPFLEAHLPWGKRRRMSGNLRLKISGGGRVARRVATSGGREWGVWGGVFCAAEGRELVVYDAESDSNAGLPPRARYLVMGVRALKTGPNAAELEVTVADESEVSSLGWRERASTGPGVAFVETRSVTLTASGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSTIEDILGVSTAMTNPGCVLKSVVFDAAEAAASAAEAAAPGPLSSPELTAGS-----------------XXXXXXXXTRKLTVAPSASLRGLFSFFES 619
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BLAST of mRNA_P-littoralis_Contig194.102.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 4.680e-50
Identity = 93/126 (73.81%), Postives = 105/126 (83.33%), Query Frame = 0 
Query:   91 MGVRSVKTGPNAMELDVTVADESELVTLGWPSNAGAAPGLPFIETRSVTLTAAGRHEHARWELALEEAQSWTECKEREALMEELELSLPFRETAFDHVQRCLPDATIENMLGVSAAKNNPGCVLKS 216
            MGVR++KTGPNA EL+VTVADESE+ +LGW   A   PG+ F+ETRSVTLTA GRHEHARW LALEEAQSWTE KEREAL+EELELSLPFRE A +HV   LPD+ IE++LGVS A  NPGCVLKS
Sbjct:    1 MGVRALKTGPNAAELEVTVADESEVSSLGWRERASTGPGVAFVETRSVTLTAYGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSAIEDILGVSTAMTNPGCVLKS 126
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8H8_9PHAE2.640e-9464.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB4_ECTSI4.680e-5073.81Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig194contigP-littoralis_Contig194:279064..284185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig194.102.1mRNA_P-littoralis_Contig194.102.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig194 279062..284185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig194.102.1 ID=prot_P-littoralis_Contig194.102.1|Name=mRNA_P-littoralis_Contig194.102.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
AAGGGGGGGGGGGEGLGAGCAGSMPLPTRGAFLEANLPWGKRRRISGNLR
WKMGQRTRKVFCAAEGRELVVYDLEDDSNAGLPPRARYLVMGVRSVKTGP
NAMELDVTVADESELVTLGWPSNAGAAPGLPFIETRSVTLTAAGRHEHAR
WELALEEAQSWTECKEREALMEELELSLPFRETAFDHVQRCLPDATIENM
LGVSAAKNNPGCVLKSMVFDAAEAAASAGPLSSPELTGSAGPGLGFSRHA
SYSGGGGGGGGGSSSAWKLSGAPSSSFRGLLSIFDSSARSPQGDEASGGG
GGYVS
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