prot_P-littoralis_Contig19.73.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.73.2
Unique Nameprot_P-littoralis_Contig19.73.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length310
Homology
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BLAST of mRNA_P-littoralis_Contig19.73.2 vs. uniprot
Match: D7FLT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT2_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 2.120e-88
Identity = 130/193 (67.36%), Postives = 156/193 (80.83%), Query Frame = 0 
Query:  117 MFFTRDMDNSFYQEMIMISCLYAAAVDLYWAWAWLDAAGNWVSSVPQLAAAIASIFGAKAHLPSNILEDRRRFTALLLVATHGVAFFFGATFYAGFRWLVYFVGVALSARLFWTKVEDVNVALGTLTIVACMLLAAADLWIAVWCLTPTYDDDDLPSKWIMVIPNVGAALASVYTSYTLVQDRKLLADILVTV 309
            MFF RDMDNS YQEM+M+ C + AAVDL+WAW WL+   +WV ++PQLAA + SI+ AK H+PSNILEDRRRFT LLL+ THGVAFFFG+TFY GF+W+VY  GVA+SARLF TKVEDVN+ LG L I+ C LLAAAD+WI  W LTP  +DD+LP KW+ + PN  AA+AS YT+YTLVQDR+LLA ILVTV
Sbjct:    1 MFFVRDMDNSVYQEMVMVCCFFLAAVDLFWAWVWLNLEADWVRALPQLAAGVVSIYAAKIHIPSNILEDRRRFTGLLLLVTHGVAFFFGSTFYPGFQWVVYLAGVAMSARLFMTKVEDVNLPLGILAIIICFLLAAADVWIVTWSLTPR-EDDELPRKWVTLFPNSMAAIASAYTAYTLVQDRRLLASILVTV 192
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BLAST of mRNA_P-littoralis_Contig19.73.2 vs. uniprot
Match: A0A6H5JGV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV6_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.150e-26
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0 
Query:  117 MFFTRDMDNSFYQEMIMISCLYAAAVDLYWAWAWLDAAGNWVSSVPQLAAAIASIFGAKAHLPSNILEDRRR 188
            MFF RD DNS YQEM+M+ C + AAVDL+WAW WLD   +WV ++PQLAA + SI+ AK H+PSNILEDRRR
Sbjct:    1 MFFVRDADNSMYQEMVMVCCFFLAAVDLFWAWVWLDLEADWVRALPQLAAGVVSIYAAKIHIPSNILEDRRR 72
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.73.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLT2_ECTSI2.120e-8867.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGV6_9PHAE3.150e-2665.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:381534..393713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.73.2mRNA_P-littoralis_Contig19.73.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 381143..399595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.73.2 ID=prot_P-littoralis_Contig19.73.2|Name=mRNA_P-littoralis_Contig19.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=310bp
MDHSGNFCMHHSGNFCSPVPPPFFCSFLDARDFLFFPVYTRTRRSSIPRK
SSHPRGLLSSTENNHHKHILLLSAAQVLATLLVVTHVAAMVFASTGGLVT
LPSWFVRTAIIAISVRMFFTRDMDNSFYQEMIMISCLYAAAVDLYWAWAW
LDAAGNWVSSVPQLAAAIASIFGAKAHLPSNILEDRRRFTALLLVATHGV
AFFFGATFYAGFRWLVYFVGVALSARLFWTKVEDVNVALGTLTIVACMLL
AAADLWIAVWCLTPTYDDDDLPSKWIMVIPNVGAALASVYTSYTLVQDRK
LLADILVTV*
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