prot_P-littoralis_Contig19.155.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig19.155.1
Unique Nameprot_P-littoralis_Contig19.155.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length169
Homology
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BLAST of mRNA_P-littoralis_Contig19.155.1 vs. uniprot
Match: A0A6H5JND2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.210e-11
Identity = 58/159 (36.48%), Postives = 74/159 (46.54%), Query Frame = 0 
Query:    1 MGEPVIGSIVCGSIALVMMFWNWRMIQDQKHRGRICAKEAASAARARAKTQQLAMTNNAHHHTLQTHALSSESLAEAAAFAP-----------AAAPSKSSHHVVKLESLPEWDESSPEEEENEEHTIN-KEVRERFETATMSPPLSSARSRSGTTFFF 147
            MGEP+I SI CGSIA+VM+ WNWRM + QK RG+ CA                                                        A  PS+    V+KLESLPE +ES+ + ++ +   +   + RER ETA +SPPLSS RSRSGT  FF
Sbjct:    1 MGEPIIASITCGSIAVVMLLWNWRMYELQKTRGKACAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAICPSR----VIKLESLPECNESTSQSQDKQSPLLLVTKPRERLETAPLSPPLSSTRSRSGTGCFF 155
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JND2_9PHAE1.210e-1136.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:732994..738753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.155.1mRNA_P-littoralis_Contig19.155.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig19 732884..739425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig19.155.1 ID=prot_P-littoralis_Contig19.155.1|Name=mRNA_P-littoralis_Contig19.155.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=169bp
MGEPVIGSIVCGSIALVMMFWNWRMIQDQKHRGRICAKEAASAARARAKT
QQLAMTNNAHHHTLQTHALSSESLAEAAAFAPAAAPSKSSHHVVKLESLP
EWDESSPEEEENEEHTINKEVRERFETATMSPPLSSARSRSGTTFFFDGS
DGDSAVDHHRRSLEAVSS*
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