prot_P-littoralis_Contig189.43.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig189.43.1
Unique Nameprot_P-littoralis_Contig189.43.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1000
Homology
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: A0A6H5KYW1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW1_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.080e-27
Identity = 118/284 (41.55%), Postives = 140/284 (49.30%), Query Frame = 0
Query:   15 IATDAPTVQARVNVPDFVDRSAWLKRQSRRRRASIGGTSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLATDSSYGSTSSRLSVMSTPARRTQQRWPEDVGGGGGLRAAQRTVTFAVAGNGDRGRYRRHSLGNPESHAGVGPAAAXXXXXXXXXLSRSSSLSSISGRCGVCQDEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKRCARGSAAPQVV-VVASTRWQPPPAVAPHMRITGVEPVVQAAGVAQAARRSVGSTARVFAGV 297
            I +DAP  QA V VPD VDR  WLK +SRRR      +S        S   P   A+ PS  R+            S++STTSSLAT++S        S MSTP  R Q                +R+VTFAV    D  R R     NP        +A      XXXX            +CGVC+ EFTRYRRPHRCRAC K VCATCSPARLPKRTCK CA  SA P+V  VV+  R +    V+PH       P  +     +A+RR VG+T  V AGV
Sbjct:   30 IVSDAPMTQAHVRVPDSVDRPEWLKLRSRRRSDRRRASS-------ASSTHPTLGAIPPSHSRKM-----------SMDSTTSSLATEASL------RSAMSTPLHRGQND-----------ERVRRSVTFAVD---DHDRRRPSLDSNPRRR--TASSAGRKIFPXXXXXXXXXXXXXXXXQCGVCRAEFTRYRRPHRCRACSKVVCATCSPARLPKRTCKPCAGDSAIPRVFSVVSPARGR----VSPHA------PGEETTSATRASRRCVGAT--VMAGV 261          
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: D7FJP7_ECTSI (Rho guanine nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP7_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.220e-26
Identity = 98/238 (41.18%), Postives = 113/238 (47.48%), Query Frame = 0
Query:   15 IATDAPTVQARVNVPDFVDRSAWLKRQSRRRRASIGGTSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLATDSSYGSTSSRLSVMSTPARRTQQRWPEDVGGGGGLRAAQRTVTFAVAGNGDRGRYRRHSLGNPESHAGVGPAAAXXXXXXXXXLSRSSSLSSISGRCGVCQDEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKRCARGSAAPQVVVVAS 252
            + +DAP  QA V VPD VDR+ WLK +SRR                    PP H                   R  S++STTSSLAT++S        S MSTP  R Q                +R+VTFAV    D    RR SL +                       R  + SS   +CGVC+ EFTRYRRPHRCRACGKAVCATCSPARLPKRTCK CA  SA P+V  V S
Sbjct:   27 MVSDAPMTQAHVRVPDSVDRTEWLKLRSRRXXXXXXXXXXXXXXPTLGATPPSHG------------------RKMSMDSTTSSLATEASL------RSAMSTPLHRGQND-----------ERVRRSVTFAV----DDHDRRRPSLDSEP---------------------RRRAASSAQQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKPCAGDSAIPRVFPVVS 204          
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: A0A6H5JMZ6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ6_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.510e-17
Identity = 97/256 (37.89%), Postives = 124/256 (48.44%), Query Frame = 0
Query:    8 HDQPKTAIATDAPTVQARVNVPDFV-DRSAWLKR--QSRRRRASIGG----TSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLATDSSYGSTSSRLSVMSTPA------RRTQQRWPEDVGGGGGLRAAQRTVTFAVAGNGDRGRYRRHSLGNPESHAGVGPAAAXXXXXXXXXLSRSSSLSSISGRCGVCQDEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKRCARG 241
            H+QP+    +DAP +QARV +P+   DR  WLK+  QSRRR+    G    T  DG+  P S   P  +A   S  RER        RDSS+         +S   S +SRLS +STP       +  QQR  + VG              +VAG+ DR R  R   G+    +     +          +S + SLS  S  CGVC+ EFTR RRPHRCR C +AVCA+CSP RLP         KRTC+ CA G
Sbjct:   27 HNQPR-GPPSDAPLLQARVRIPESATDRREWLKQHSQSRRRQQPSPGSGLKTPHDGRRRPSSRFRPHAHAASNSEFRERTT-----SRDSSV------AGGESDTSSVNSRLSTVSTPEISQRQRKMLQQRHQQVVG------------PASVAGSPDRTRRSRVPHGSITRSSSSASTSV---------VSSAPSLSQQS--CGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAGG 247          
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: D8LGV1_ECTSI (FYVE, RhoGEF and PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV1_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.870e-13
Identity = 105/335 (31.34%), Postives = 133/335 (39.70%), Query Frame = 0
Query:   10 QPKTAIATDAPTVQARVNVPDF-----VDRSAWLKRQS--RRRRASIGGTSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLATD----SSYGSTSSRLSVMSTP---ARRTQQRWPEDVGGGG-----------GLRAAQRTVTFAVAGNGDRGRYRRHSLGNPESHAGVGPAAAXXXXXXXXXLSRSSSLSSISGR--------CGVCQDEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKRCARGSAAPQVVVVASTRWQPPPAVAPHMRITGVEPVVQAAGVAQAARRSVGSTARVFAGVASKVV 302
            QP  A  +DAP +QARV +PD      +DR  WLK+QS  RRRR   G  S                                    SS +S  SSLA D    SS  STSSRLS++STP    R+ + R                    G  AA   V                        +    + +         L+R++S SS+S          C VC+ EFT+ RRPHRCR C + VCA CSPARLP         KRTCK C    AA   +V A+   + P AV          P  + A + +    S+GS AR   G+ SK V
Sbjct:  128 QPPAAAVSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSR-----------------------------------SSYDSEVSSLAGDDSDTSSVASTSSRLSIVSTPEISGRKWKTRQXXXXXXXXXXXXXXXXXXVGRPAATPVVGXXXXXXXXXXXXXXXXXXXXXRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPLVGAAAPSRRPNAVG-----AAAAPSPRVARITKRRSASMGSAARAPVGILSKPV 422          
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: A0A6H5JBA2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.580e-12
Identity = 95/275 (34.55%), Postives = 112/275 (40.73%), Query Frame = 0
Query:   21 TVQARVNVPDF-----VDRSAWLKRQS--RRRRASIGGTSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLATDSS----YGSTSSRLSVMSTP---ARRTQQR------WPEDVGGGGGLRAA----QRTVTFAVAGNGDRGRYRRHSLGNPESHAGVGPAAAXXXXXXXXXLSRSSSLSSISGR-CGVCQDEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKRCARGSAAPQVVVVASTRWQPPPAV 261
            T  ARV +PD      +DR  WLK+QS  RRRR   G  S                                    SS +S  SSLA D S      STSSRLS++STP    R+ Q R                LR++      T      G+   G   R S  +  S + VG              S SS LS    R C VC+ EFT+ RRPHRCR C + VCA CSPARLP         KRTCK C    AA    V A+T  + P AV
Sbjct:    6 TATARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSR-----------------------------------SSYDSDASSLAGDDSDTCSVASTSSRLSIVSTPEISGRKWQTRKQXXXXXXXXXXXSNSLRSSLGRPAATPLVGSPGSSVSGGGSRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEGEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPRVGAATPSRRPKAV 245          
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Match: D8LNU4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU4_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.170e-8
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  188 SSSLSSISGR-CGVCQDEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKRCARG 241
            +SS  S+S + CGVC+ EFTR RRPHRCR C +AVCA+CSP RLP         KRTC+ CA G
Sbjct:   44 ASSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAGG 107          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KYW1_9PHAE1.080e-2741.55FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FJP7_ECTSI1.220e-2641.18Rho guanine nucleotide exchange factor n=1 Tax=Ect... [more]
A0A6H5JMZ6_9PHAE1.510e-1737.89FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGV1_ECTSI1.870e-1331.34FYVE, RhoGEF and PH domain-containing protein n=1 ... [more]
A0A6H5JBA2_9PHAE2.580e-1234.55FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNU4_ECTSI1.170e-857.81FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 184..244
e-value: 0.0019
score: 17.4
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 196..233
e-value: 8.3E-8
score: 32.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 188..250
e-value: 2.0E-7
score: 32.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 898..999
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..849
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 914..969
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 798..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 984..999
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 557..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..761
NoneNo IPR availableCDDcd00065FYVE_like_SFcoord: 198..239
e-value: 4.61816E-13
score: 62.5496
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 192..238
score: 8.801527
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 195..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:208967..221672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.43.1mRNA_P-littoralis_Contig189.43.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig189 208764..221704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig189.43.1 ID=prot_P-littoralis_Contig189.43.1|Name=mRNA_P-littoralis_Contig189.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1000bp
MSTRTDDHDQPKTAIATDAPTVQARVNVPDFVDRSAWLKRQSRRRRASIG
GTSPDGKSFPGSLNPPKHNALRPSRDRERNDPRPPRHRDSSLESTTSSLA
TDSSYGSTSSRLSVMSTPARRTQQRWPEDVGGGGGLRAAQRTVTFAVAGN
GDRGRYRRHSLGNPESHAGVGPAAAAAAAAGTTTLSRSSSLSSISGRCGV
CQDEFTRYRRPHRCRACGKAVCATCSPARLPKRTCKRCARGSAAPQVVVV
ASTRWQPPPAVAPHMRITGVEPVVQAAGVAQAARRSVGSTARVFAGVASK
VVSFVAAAGAAAAQSAATGVGGVVEHFGEREREALSNNLDGVDEGSAESG
DDDRGEKGVKVMDSLVGVVGEGALEERPSGVVDEGMNELESLDRDRGDVV
VADSFADSCRIEGTAAKPPGIVWPLREKSLTTPTRGEKAAAVPEGRGGSL
AVISAAGPDGNSAADNGGTSENAGGHVVVPGPIAGIAAADGRDCAVPSQE
GRNDDGGEAGEVARGSLAAISAVKMAVSPAAVDGASGHEDVLSGKAKEMP
EFVVDKSEASSATSTETASPAPPTAASAVGRSEPSPTDVALHSPDPLLPG
GASDSAEGHFDVSGHETGTTADDGDRAVPLDESGGDDGGGEEGEVDVASL
ATGSLAEVAASPATVYKESGNDNTLGWEARGKEQRMRDIVAQSEVSSTTT
TNSAAITLPTPTAAAAAGAFPTTAAAAAAATTSMLPPPSPNPKDAEEQSA
TMNSKCMVLTDPATTGNLEHRPVTIPQEQAKTIASGREPAIISEEPPQPE
KGGEEGEGEEEKGGNVVLSQPLRCRRPRNDEDGCIEEEGVTPTERTGIDI
QEAQVDITWVSVVGGGVGDEQQESIGGAVDEVDVHCCIEGSGLDNEVDAR
NESGVLAEHAGRSRTASPVDEETIWEDREKIESSVAAHPGPGEKREDGEG
ERENDEARGAGDGRGGYQRQEREGPVPAEAVGSKVDNRCDEALKPPELL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD