prot_P-littoralis_Contig189.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig189.38.1
Unique Nameprot_P-littoralis_Contig189.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length313
Homology
BLAST of mRNA_P-littoralis_Contig189.38.1 vs. uniprot
Match: A0A6H5LGR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGR8_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.510e-32
Identity = 155/325 (47.69%), Postives = 187/325 (57.54%), Query Frame = 0
Query:    1 MSAISGASSRPQRSSSTTRS-RRATLSVGQHGGSLLGNGSLSPQRAMRTRVLRERSNDGGGGVQHSSSDVVGAAGTVKELAKVASKGATKAQQMQFAFGSKVTKPSSSGKG---GMTSAAGV-PTRGRASGIGAVVADAGNAPARSRRERTVRHEPQEXXXXXXXXXXXXXXXXXXXXXHQSTIPTREQAENA---------ALKVRLEEQEAMVANLKRQLAKEHPEGEDGVSGGKSAAAPATRAASGGTLKVDGGDAAKRGQQQLDEVDEGEQAALRAVEEEARGEAEAKLAKAEAMAAAGLSHLSEMQARVDEMIRVLKAQR 311
            MS + GASS+  RSSSTTRS RRATL +G          SLSP+R MRT V RER+NDG              A   KE  K ASKG T+ QQMQFAFGSK+ KPSS+G G   GM S+  V PTRGR +                            XXXXXXXXXXXXXXXXXXXXX                       ALKV+LEE+E+++A L+RQL  +   G+ GV G      P+T +++  T K          QQQ DE++EGEQAALRAV+EEAR +AE KL++ EA+ +AGL+ LSEMQ RVDEMIR LKA+R
Sbjct:    1 MSTVGGASSK--RSSSTTRSSRRATLGIG----------SLSPERFMRTAVFRERNNDG--------------AVKAKETTK-ASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKVQLEEKESVIAELRRQLEAKAGGGDSGVKG------PSTLSSASDTSKQ---------QQQSDELNEGEQAALRAVQEEARADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARR 283          
BLAST of mRNA_P-littoralis_Contig189.38.1 vs. uniprot
Match: D7FJP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP6_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.970e-24
Identity = 127/234 (54.27%), Postives = 144/234 (61.54%), Query Frame = 0
Query:    1 MSAISGASSRP-QRSSSTTRS-RRATLSVGQHGGSLLGNGSLSPQRAMRTRVLRERSNDGGGGVQHSSSDVVGAAGTVKELAKVASKGATKAQQMQFAFGSKVTKPSSSGKG---GMTSAAGV-PTRGR----ASGIGAVVADAGNAPARSRRERTVRHEPQEXXXXXXXXXXXXXXXXXXXXXHQSTIPTREQAEN-----AALKVRLEEQEAMVANLKRQLAKEHPEGEDGV 219
            MS I GASS+  QRSSSTTRS RRATL +G          SLSP+R+MRT VLRERSNDG              A   KE  K ASKG T+ QQMQFAFGSK+ KPSS+G G   GM S   V PTRGR    A   GAV AD G+A ARSRRER   H+   XXXXXXXXXXXXXXXXXXXXX                  AALKV+LEE+E+++A L+RQL  +   G+ GV
Sbjct:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIG----------SLSPERSMRTAVLRERSNDG--------------AVKAKETTK-ASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSGGAVMPTRGRTTTTAHSGGAVAADTGSALARSRRERAXXHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKVQLEEKESVIAELRRQLEAKAGGGDSGV 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LGR8_9PHAE1.510e-3247.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJP6_ECTSI1.970e-2454.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..285
NoneNo IPR availableCOILSCoilCoilcoord: 293..312
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:188924..194454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.38.1mRNA_P-littoralis_Contig189.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig189 188683..195869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig189.38.1 ID=prot_P-littoralis_Contig189.38.1|Name=mRNA_P-littoralis_Contig189.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=313bp
MSAISGASSRPQRSSSTTRSRRATLSVGQHGGSLLGNGSLSPQRAMRTRV
LRERSNDGGGGVQHSSSDVVGAAGTVKELAKVASKGATKAQQMQFAFGSK
VTKPSSSGKGGMTSAAGVPTRGRASGIGAVVADAGNAPARSRRERTVRHE
PQEQQQRASSHGRGRARAEHQHQHHQSTIPTREQAENAALKVRLEEQEAM
VANLKRQLAKEHPEGEDGVSGGKSAAAPATRAASGGTLKVDGGDAAKRGQ
QQLDEVDEGEQAALRAVEEEARGEAEAKLAKAEAMAAAGLSHLSEMQARV
DEMIRVLKAQRE*
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