prot_P-littoralis_Contig184.72.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig184.72.3
Unique Nameprot_P-littoralis_Contig184.72.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length498
Homology
BLAST of mRNA_P-littoralis_Contig184.72.3 vs. uniprot
Match: D8LGR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR7_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 7.630e-89
Identity = 235/509 (46.17%), Postives = 278/509 (54.62%), Query Frame = 0
Query:    2 MERERRQQGYSRRVSQHDNLEVSRSNHEEFRKGIF-CSKRDSCPVSTLTADPAFFEVPSEDST--TSAARIDAAIEAALASDSMRGVDTFYQPH--PPGSASSMLGFPPDPHGDWREGGGGVLAVIQDPGTASMVY---PPPRTAGDPWSRENGGGGVEHRPHHWPTTASPRRGIPSRTRRYEILALPPAKD-SLGSANAGRRSGSVGESDSSGNADTNSXXXXXXXGGMRTY------GDGHKRHXXXXXXXXXGAQQPTRSAWM-RGGGLDTPRAVWQVEPPVALGAVVPMSGGSAEGFSSVGSSAEVGRSERSRHQSQSDHDYERHNAGSTGALGPPAASDLDMPPVDTTGGGTGGPAIRYGEGGGGQEVTLTPPGYDEPLELPDGCHHISLTKFLEVMTGPGLRVRKHHRTGKGSSGLRVLRYSEEGDNLTWDSHKILGAAQHVLPMSDVENVSMQARNRVVLLCVGGKDSYAVFEAANEDAAAVLFVGGSVKAVRKKKRRTSKG 494
            M  E RQ+ Y+RR SQHD+LE SRS HE+FR  +F  SK D     T  +  A     S DS+  T+AARIDAAI+AA+A D+ RG +TF + +  P GSA+S+ G                      PG         P PR  G  + R++G G      +      S   G  S       +  PPA D S+ + +   RS S G            XXX      M  +             XXXXXX     QQ TR+ W  R      PR  WQ +P V        S  ++ G    G  A + +     H   S    E H A S GA+ PP     DMPPV T GG +GG A+ +  GGGG  V LTP GYDEPLELPDGCHHISL KFLEVMTGPGLRVRKHHR GKGSSGLRVLRY+ EGD+LTWDSHKILGAAQHVLPMSDVENVSMQ   RVVL+CVGGKDSYAVFEAAN+DAAAVL+VG     + + + RT  G
Sbjct:    1 MSSELRQKAYTRRASQHDDLEESRSLHEQFRSSMFSASKADRLNARTTISGGAGGAGSSCDSSESTTAARIDAAIKAAMAHDATRGANTFNRLNLTPEGSAASLGG----------------------PGRGXXXXXXAPYPRMGGGDYYRDSGSGSGYAGAYRTYNPGSASGGGDS----TGYMNRPPAADDSVATGSVSHRSMS-GXXXXXXXXXXXXXXXGVGAAAMDPFFHRVPXXXXXXXXXXXXXXAPHHHQQQTRAIWEPRANVPPAPRPAWQPDPSVEAEEPEDTSSSASSG----GGDARLAK----LHPQPSRDFQEHHQADSMGAIAPPERPQ-DMPPVRTDGG-SGGDALDH-MGGGGAGVALTPAGYDEPLELPDGCHHISLAKFLEVMTGPGLRVRKHHRAGKGSSGLRVLRYNAEGDSLTWDSHKILGAAQHVLPMSDVENVSMQPGKRVVLMCVGGKDSYAVFEAANDDAAAVLYVG-----LERLRERTQSG 466          
BLAST of mRNA_P-littoralis_Contig184.72.3 vs. uniprot
Match: A0A6H5J9D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9D1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 8.030e-11
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    2 MERERRQQGYSRRVSQHDNLEVSRSNHEEFRKGIFCSKRDSC--PVSTLTADPAFFE--VPSEDSTTSAARIDAAIEAALASDSMRGVDTFYQPH--PPGSASSMLGFPP 105
            M  E RQ+ Y+RR S+HD+LE SR+ HE+FR  +F + R     P +T++A P   +    S +S+TSAARIDAAI+AA+A+D+ RG  TF   +  P GSA+S+ G PP
Sbjct:    1 MSSELRQKTYTRRASRHDDLEESRTLHEQFRSSMFSASRADPLNPRTTISAGPGGADRYCDSSESSTSAARIDAAIKAAMANDANRGATTFNHLNLTPEGSAASLGGPPP 110          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig184.72.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGR7_ECTSI7.630e-8946.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9D1_9PHAE8.030e-1147.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig184contigP-littoralis_Contig184:208998..216697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig184.72.3mRNA_P-littoralis_Contig184.72.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig184 208578..217033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig184.72.3 ID=prot_P-littoralis_Contig184.72.3|Name=mRNA_P-littoralis_Contig184.72.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=498bp
MMERERRQQGYSRRVSQHDNLEVSRSNHEEFRKGIFCSKRDSCPVSTLTA
DPAFFEVPSEDSTTSAARIDAAIEAALASDSMRGVDTFYQPHPPGSASSM
LGFPPDPHGDWREGGGGVLAVIQDPGTASMVYPPPRTAGDPWSRENGGGG
VEHRPHHWPTTASPRRGIPSRTRRYEILALPPAKDSLGSANAGRRSGSVG
ESDSSGNADTNSGGGGGGVGGMRTYGDGHKRHGGGGGSGSGGAQQPTRSA
WMRGGGLDTPRAVWQVEPPVALGAVVPMSGGSAEGFSSVGSSAEVGRSER
SRHQSQSDHDYERHNAGSTGALGPPAASDLDMPPVDTTGGGTGGPAIRYG
EGGGGQEVTLTPPGYDEPLELPDGCHHISLTKFLEVMTGPGLRVRKHHRT
GKGSSGLRVLRYSEEGDNLTWDSHKILGAAQHVLPMSDVENVSMQARNRV
VLLCVGGKDSYAVFEAANEDAAAVLFVGGSVKAVRKKKRRTSKGWIW*
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