prot_P-littoralis_Contig182.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.42.1
Unique Nameprot_P-littoralis_Contig182.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length118
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig182.42.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.650e-39
Identity = 65/110 (59.09%), Postives = 86/110 (78.18%), Query Frame = 0 
Query:    1 MKFVDPSRKTSVVDFDRFALEWNKTVSVMEEEDAATIIPIFRKTAGQLKSYWNEHHESINIRDTMRPIRLQEGPVRNHLRLPDDVGGAATAVAQPWALQPPDGFEFPTQL 110
            ++FVDP+ + +++DFD FALEWNK VS+MEE  +A +IPIFRKTAG LK+YW  HHE +N+RDT+RP R ++ P+R HLR P DVGG A  +AQPW L+ P+GF+ P QL
Sbjct: 1029 LEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSA-VIPIFRKTAGHLKAYWKAHHEQVNMRDTLRPARGRDAPIREHLRAPGDVGGPAGGLAQPWILEAPEGFQMPEQL 1137
[Close]
BLAST of mRNA_P-littoralis_Contig182.42.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.400e-12
Identity = 33/52 (63.46%), Postives = 44/52 (84.62%), Query Frame = 0 
Query:    1 MKFVDPSRKTSVVDFDRFALEWNKTVSVMEEEDAATIIPIFRKTAGQLKSYW 52
            ++FVDP+ + +++DFD FALEWNK VS+MEE  +A +IPIFRKTAG LK+YW
Sbjct:  456 LEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSA-VIPIFRKTAGHLKAYW 506
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE7.650e-3959.093'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JD89_9PHAE1.400e-1263.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:180911..181443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.42.1mRNA_P-littoralis_Contig182.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 180887..181443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.42.1 ID=prot_P-littoralis_Contig182.42.1|Name=mRNA_P-littoralis_Contig182.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp
MKFVDPSRKTSVVDFDRFALEWNKTVSVMEEEDAATIIPIFRKTAGQLKS
YWNEHHESINIRDTMRPIRLQEGPVRNHLRLPDDVGGAATAVAQPWALQP
PDGFEFPTQLPALPAAGE
back to top