prot_P-littoralis_Contig18.43.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.43.1
Unique Nameprot_P-littoralis_Contig18.43.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length156
Homology
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 7.690e-53
Identity = 97/114 (85.09%), Postives = 99/114 (86.84%), Query Frame = 0
Query:    1 MSRHCVSVLLLVCNAQACLAFVPSWTATFRSSRLQPPASTPAAATFSLSQLSGAICPVFGPCGAYGAAHMFYPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQ 114
            MSR+CVSVLLLV  AQACLAFVPSWTATFRSSR QPPASTPAAATFSLSQ SG ICPVFG C   GA   FYPV G+TSLSAMSEG EEEGGGDH AREAADGSPAADEIRAVQ
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGA-QFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQ 113          
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.080e-21
Identity = 51/70 (72.86%), Postives = 52/70 (74.29%), Query Frame = 0
Query:   70 MFYPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKID 139
            MFYPVRG+T LSAMSEGDEEEGGGDH AREAAD  PAADEIRAVQ              EETAEVVKKID
Sbjct:    1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKID 70          
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.110e-15
Identity = 46/63 (73.02%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   77 ITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKID 139
            +TSLSAMSEGDEEEGGGDHDAREAAD  PAADEIRAVQ         X    +ETAEVVKKID
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKID 63          
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.160e-15
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 0
Query:   77 ITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXX-------EETAEVVKKID 139
            +TS SAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXX       EETAEVVKKID
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKID 70          
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.210e-15
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
Query:   70 MFYPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQ 114
            M YPVRGITSLSA+SEG+EE+GGGDHD REAA GSPAADEIRAVQ
Sbjct:    1 MVYPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQ 45          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM56_ECTSI7.690e-5385.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI4.080e-2172.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI1.110e-1573.02Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI2.160e-1587.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI2.210e-1586.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:212195..212662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.43.1mRNA_P-littoralis_Contig18.43.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 212195..213003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.43.1 ID=prot_P-littoralis_Contig18.43.1|Name=mRNA_P-littoralis_Contig18.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
MSRHCVSVLLLVCNAQACLAFVPSWTATFRSSRLQPPASTPAAATFSLSQ
LSGAICPVFGPCGAYGAAHMFYPVRGITSLSAMSEGDEEEGGGDHDAREA
ADGSPAADEIRAVQDEIRGVERKIEGAEEETAEVVKKIDGTVLRLLLLGA
PGTSE*
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