prot_P-littoralis_Contig18.14.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.14.2
Unique Nameprot_P-littoralis_Contig18.14.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length118
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig18.14.2 vs. uniprot
Match: A0A7S2WVK6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVK6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.320e-6
Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:   18 GRPPPRGAPPGGEWETEPFCGARSWLVGIFCWCVICCPIDKKMALVA 64
            G PPP+GAPPGG W+ E +CG  ++++     CV CCP D++    A
Sbjct:  133 GIPPPQGAPPGGVWKIEKYCGCVTFMIAFIFPCVCCCPCDEQRIYTA 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.14.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2WVK6_9STRA3.320e-644.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:98766..107273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.14.2mRNA_P-littoralis_Contig18.14.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 90394..107273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.14.2 ID=prot_P-littoralis_Contig18.14.2|Name=mRNA_P-littoralis_Contig18.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp
MTEANSEAVTGQPAKTEGRPPPRGAPPGGEWETEPFCGARSWLVGIFCWC
VICCPIDKKMALVASRDGPLLAAAHRVDGALLVRVAAAALGGALLLAAAH
HDDGPLLLVLVAAHGAPS
back to top