prot_P-littoralis_Contig178.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig178.1.1
Unique Nameprot_P-littoralis_Contig178.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length176
Homology
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BLAST of mRNA_P-littoralis_Contig178.1.1 vs. uniprot
Match: A0A6H5KBY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.210e-18
Identity = 51/86 (59.30%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:   87 PRFRSLPARAPSNTV------SDANVAPGTSTTSSAVASTPWPGPDFKVSQVLPGSVYLWACNERGEGGGTSPVSRAEACAAWVVL 166
            PR  S PARAP +TV      S+AN  PGT T      +TPWPG DF++ +VLP SVYLWAC ERGEG    PVSR+EA AAWVVL
Sbjct:   81 PRSDSFPARAPVHTVGRGHDASEANNRPGTLT------ATPWPGKDFRLKKVLPDSVYLWACGERGEGDAPYPVSRSEAVAAWVVL 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBY2_9PHAE2.210e-1859.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig178contigP-littoralis_Contig178:13310..16585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig178.1.1mRNA_P-littoralis_Contig178.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig178 13297..16627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig178.1.1 ID=prot_P-littoralis_Contig178.1.1|Name=mRNA_P-littoralis_Contig178.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp
MAESDNGGDSADATFTAQQQAHNAHHVVGSMNHSGSRLAAQIQDPVQATA
GGRDEGERRAEATSDDPGEEVPELTMLLARDRCPLLPRFRSLPARAPSNT
VSDANVAPGTSTTSSAVASTPWPGPDFKVSQVLPGSVYLWACNERGEGGG
TSPVSRAEACAAWVVLTVSAEFLHL*
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