prot_P-littoralis_Contig176.5.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig176.5.2
Unique Nameprot_P-littoralis_Contig176.5.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length609
Homology
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BLAST of mRNA_P-littoralis_Contig176.5.2 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 1.940e-123
Identity = 292/507 (57.59%), Postives = 337/507 (66.47%), Query Frame = 0 
Query:  104 TNNPDLQCVPANVASTLDVDTISVDMCGCSPIEAVTCEVGVPCMPGEFGYTCSTAAPSPAPTPMPTGLXXXXXXXXXXXAKTPCLNPTSEAYKCNVNGTELELSYCGITDDDLGDVEGCLDVFGRATATRVFLRFNYLTNLPEDLFEGLGSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISL-DLRLNSDLQCVPANTATAVDVNELASGACGCSLTRPAACDAGQTCMPGEYGYTCATLAPTPAPVAPGNNTCLDPASEDYLCDTAGTEIDFSYCGLTDDSLDEVAACINVFGRDTVTHVYLRYNYLTAIPADLFEGCENLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFQQQIVNSTTGXXXXXXXXXXXXXXXXXXXXXXEELGSLEILDLRLNPDLQCIPN-NVAVTQNVDDVSYDMCECTPSRAVTCGAGLGCVPGQFGYTCGV 608
            T+NPDLQCVPAN A TL+VD  +V  CGC+P EAV C  GV C+PGE GY+C T AP           XXXXXXXXXXXAK PCL+P SEAY C+VNGTE+ L YCGITDDDL DVE CLDV GR + T +++RFNYLT +PE LF+GLG L+                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DLRLN +LQCVPA+ A  V+  E++SG CGCSL     CD G  C+PGE G+TCAT APTPAPV PGNNTCLDPASE Y+C   GTE+D +YCG+TDD+L+E+AAC++VFGRD V  V L YNYLT    DLF G  ++    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   Q Q  NST G                      + L  L  LDLRLNPDLQC+P  + AV+ + + +S D+CEC+P +A  C AG  CVPG+FGYTCGV
Sbjct:   98 TSNPDLQCVPANDAITLEVDDTTVGTCGCAPAEAVMCGDGVFCIPGELGYSCGTTAPXXXXXXXXXXXXXXXXXXXXXXAKNPCLDPASEAYLCSVNGTEIHLDYCGITDDDLEDVETCLDVLGRGSMTALYVRFNYLTTIPEGLFDGLGHLEKLYLNNNGLSETLSAESFQALGKLQVLNLNGNSLTALPTDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRLNPELQCVPASAADNVETTEISSGVCGCSLAPAVLCDVGLACVPGELGFTCATSAPTPAPVLPGNNTCLDPASEHYVCGMPGTELDLAYCGITDDNLEELAACMDVFGRDAVKEVRLGYNYLTTFSGDLFHGLTHVERIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQDTNST-GPGHLQDIWMNMNLLSTLPAGLFDGLDMLTSLDLRLNPDLQCVPTTHDAVSVSAERLSSDVCECSPPQAAVCNAGQVCVPGEFGYTCGV 603
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BLAST of mRNA_P-littoralis_Contig176.5.2 vs. uniprot
Match: D7FSS1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.960e-8
Identity = 38/116 (32.76%), Postives = 51/116 (43.97%), Query Frame = 0 
Query:  140 CEVGVPCMPGEFGYTCSTAAPSPAPTPMPTGLXXXXXXXXXXXAKTPCLNPTSEAYKCNVNGTELELSYCGITDDDLGDVEGCLDVFGRATATRVFLRFNYLTNLPEDLFEGLGSL 255
            C     C PG  GY CS    S                         CL+P ++ Y C    TE+ LS CGI D+DL D+  C D  GRA+ T ++L  N  T+L   LF+G  ++
Sbjct:   16 CASNESCSPGTDGYICSIVRNS-------------------------CLDPENDLYGCEAGSTEINLSNCGIGDEDLEDLVECFDNVGRASVTAIWLGSNSFTSLAAGLFDGFDNI 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR92_ECTSI1.940e-12357.59Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D7FSS1_ECTSI1.960e-832.76Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 252..271
e-value: 37.0
score: 9.4
coord: 276..295
e-value: 110.0
score: 5.8
coord: 490..509
e-value: 100.0
score: 5.9
coord: 47..66
e-value: 34.0
score: 9.7
coord: 466..485
e-value: 130.0
score: 5.1
coord: 23..42
e-value: 47.0
score: 8.6
coord: 300..319
e-value: 120.0
score: 5.4
coord: 71..90
e-value: 150.0
score: 4.7
NoneNo IPR availablePANTHERPTHR45617:SF69SI:DKEY-1J5.4coord: 447..566
coord: 203..335
coord: 6..118
NoneNo IPR availablePANTHERPTHR45617FAMILY NOT NAMEDcoord: 203..335
NoneNo IPR availablePANTHERPTHR45617FAMILY NOT NAMEDcoord: 447..566
coord: 6..118
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 7..564
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 232..251
e-value: 150.0
score: 3.6
coord: 276..299
e-value: 0.002
score: 27.4
coord: 522..545
e-value: 0.29
score: 20.2
coord: 23..46
e-value: 9.8E-4
score: 28.4
coord: 71..94
e-value: 0.0084
score: 25.3
coord: 466..489
e-value: 13.0
score: 12.4
coord: 252..275
e-value: 0.0022
score: 27.2
coord: 300..323
e-value: 6.9E-4
score: 28.9
coord: 490..513
e-value: 0.0014
score: 27.9
coord: 47..70
e-value: 0.003
score: 26.8
coord: 446..465
e-value: 95.0
score: 5.2
coord: 6..22
e-value: 220.0
score: 2.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 5..127
e-value: 1.5E-30
score: 108.2
coord: 405..589
e-value: 4.0E-29
score: 103.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 185..365
e-value: 6.3E-28
score: 98.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 232..289
e-value: 8.4E-12
score: 44.7
coord: 445..503
e-value: 2.7E-13
score: 49.5
coord: 6..60
e-value: 1.7E-15
score: 56.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 278..299
score: 7.596445
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 49..70
score: 7.026593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig176contigP-littoralis_Contig176:30588..33415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig176.5.2mRNA_P-littoralis_Contig176.5.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig176 30588..36498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig176.5.2 ID=prot_P-littoralis_Contig176.5.2|Name=mRNA_P-littoralis_Contig176.5.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=609bp
MPRPTYLRYNSLTTIPEDLFKNLPKLERIYLSHNTLSKLPAKVFEGLGNL
QWLYLDANSLFSLPENMFQELEQLERLSFDQNALTTLPAEVFLGLRGLQD
LSLTNNPDLQCVPANVASTLDVDTISVDMCGCSPIEAVTCEVGVPCMPGE
FGYTCSTAAPSPAPTPMPTGLPSPAPTSMPTRAKTPCLNPTSEAYKCNVN
GTELELSYCGITDDDLGDVEGCLDVFGRATATRVFLRFNYLTNLPEDLFE
GLGSLDRLYVNNNALNSLPAEVFQALGKLEILNLNGNALTSLSGSLFHGL
GQLEHLWINDNLLTTLPAEIFDGLGQLISLDLRLNSDLQCVPANTATAVD
VNELASGACGCSLTRPAACDAGQTCMPGEYGYTCATLAPTPAPVAPGNNT
CLDPASEDYLCDTAGTEIDFSYCGLTDDSLDEVAACINVFGRDTVTHVYL
RYNYLTAIPADLFEGCENLEHIYVNDNSLTTVPAEVLQGLGKLQVLNMNR
NSLTALPGSLFQQQIVNSTTGFGQLHQLWLNQNSLTTLPAELFEELGSLE
ILDLRLNPDLQCIPNNVAVTQNVDDVSYDMCECTPSRAVTCGAGLGCVPG
QFGYTCGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt