prot_P-littoralis_Contig175.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig175.29.1
Unique Nameprot_P-littoralis_Contig175.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length233
Homology
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BLAST of mRNA_P-littoralis_Contig175.29.1 vs. uniprot
Match: D7FVX9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX9_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 5.210e-57
Identity = 155/233 (66.52%), Postives = 176/233 (75.54%), Query Frame = 0 
Query:    1 MVKVMFCGVVAATLLGFSCRADAWGG-RKGEEEPDMPKGKDAVDLARAGFRQVAGDVGLLNDLLKDLEDPETLKEVDKLMNXXXXXXXXXXXXXXXXXXNGAEDTMKFFQDPQSMEAMQKKAAEYTDYIAAGPGKDGKKDAAMGINSAAQEMLNPNFMKDAMEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQARLKQAGANMEEXXXXXXXMAQAQRQMQAMMGGAAA 232
            MV++MF GVVA TLLGFSCRADAWGG +K +EEP+MP GKDAVDL RAGFRQV            +L D    KE++KLM                   NGA D   F QDP++MEAM KK  EYTD+IAAGPGKDGK+DAAMG+N+A+  M++PNFMKDAMEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +L +AGANME XXXXXXXMA+AQRQ+QAMMGGAAA
Sbjct:    1 MVRLMFIGVVA-TLLGFSCRADAWGGGKKKDEEPEMPTGKDAVDLGRAGFRQV-------ESARDNLWDKNFKKEMNKLMESDEWK-------------NGATDATDFLQDPKAMEAMAKKTKEYTDFIAAGPGKDGKRDAAMGLNAASASMMDPNFMKDAMEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQLAKAGANMEXXXXXXXXMAEAQRQLQAMMGGAAA 212
[Close]
BLAST of mRNA_P-littoralis_Contig175.29.1 vs. uniprot
Match: A0A836CL55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL55_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.350e-7
Identity = 58/144 (40.28%), Postives = 75/144 (52.08%), Query Frame = 0 
Query:    9 VVAATLLGFSCRA-DAWGGRKGEEEPDMPKGKDAVDLARAGFRQVAGDVGLLNDLLKDLEDPETLKEVDKLMNXXXXXXXXXXXXXXXXXXNGAEDTMKFFQDPQSMEAMQKKAAEYTDYIAAGPGKDGKKDAAMGINSAAQEM 151
            ++   LL   C    AW G K E+EP MPKGKDAVDL  AG  Q++ D  L+  L++D+              XXXXXXXXXXXXXXXXX N  ++      DP ++  + K A +Y   +A       K  AA G N+  Q M
Sbjct:    8 LLCLALLSICCSTVSAWPGGKKEDEPKMPKGKDAVDLGMAGLGQLSRDPALMRQLMQDMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNAMKEAADMINDPSTVNEINKMAGQYAQQMA-------KVQAAGGGNTMQQAM 144
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVX9_ECTSI5.210e-5766.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CL55_9STRA5.350e-740.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig175contigP-littoralis_Contig175:169456..176722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig175.29.1mRNA_P-littoralis_Contig175.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig175 168144..176886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig175.29.1 ID=prot_P-littoralis_Contig175.29.1|Name=mRNA_P-littoralis_Contig175.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MVKVMFCGVVAATLLGFSCRADAWGGRKGEEEPDMPKGKDAVDLARAGFR
QVAGDVGLLNDLLKDLEDPETLKEVDKLMNDKKFKKEVETLMASDEWKNG
AEDTMKFFQDPQSMEAMQKKAAEYTDYIAAGPGKDGKKDAAMGINSAAQE
MLNPNFMKDAMEMMKDPAVMKQVEETMNNPEFRQQMQSMMNDPSMQARLK
QAGANMEEMMKDPELMAQAQRQMQAMMGGAAA*
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