prot_P-littoralis_Contig172.24.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig172.24.4
Unique Nameprot_P-littoralis_Contig172.24.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length266
Homology
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BLAST of mRNA_P-littoralis_Contig172.24.4 vs. uniprot
Match: D7G7H1_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7H1_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 3.900e-45
Identity = 119/213 (55.87%), Postives = 132/213 (61.97%), Query Frame = 0 
Query:   12 HVNRVACLDAFLEDFS------FDGSGDAFLHTLAKNAASPTATP-------TGSGNAAVGGVPLAEDG--GSDLRALTSGTSGXXXXXXXXXXXSG-------------GKVCPRGYYSRRLAGAAAAAARPLQAEVLKVLDFLFTSDRPLVEST--VLDKSRVVQLVARGSSRSMWLVQGSRGAPYLCLREYCSCRSFQELVRRGGEHPVL 194
            +VNRVACLDAFL+ FS       D S D    T   NA+S   TP       T SG    G + + E+G  G DLRA+TSG +G    XXXXXXX               G     G    R A A AAAA   QAE+LKVLDFLF SD PLVEST  VLDKSRVV++VAR + RS+WLVQGSRGAPYLCLREYCSCRSFQELVRRG  HPVL
Sbjct:   11 NVNRVACLDAFLQRFSGGAGSGSDSSDDFTPLTTGNNASSTPTTPRTSDRNGTPSGVRNDGALAVGEEGSDGGDLRAMTSGIAGGDRGXXXXXXXXXVDSXXXXXXXXXVGAAGSTGIARGRDATAVAAAA---QAEILKVLDFLFCSDCPLVESTIQVLDKSRVVKVVARNTGRSVWLVQGSRGAPYLCLREYCSCRSFQELVRRGAPHPVL 220
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig172.24.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7H1_ECTSI3.900e-4555.87SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig172contigP-littoralis_Contig172:104001..109725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig172.24.4mRNA_P-littoralis_Contig172.24.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig172 103929..109727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig172.24.4 ID=prot_P-littoralis_Contig172.24.4|Name=mRNA_P-littoralis_Contig172.24.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=266bp
MMELHLHGSGRHVNRVACLDAFLEDFSFDGSGDAFLHTLAKNAASPTATP
TGSGNAAVGGVPLAEDGGSDLRALTSGTSGGGGGGGGRDNRSGGKVCPRG
YYSRRLAGAAAAAARPLQAEVLKVLDFLFTSDRPLVESTVLDKSRVVQLV
ARGSSRSMWLVQGSRGAPYLCLREYCSCRSFQELVRRGGEHPVLVSWPPP
KYMVMPECFNRLLWVNVERNGSTCFVCRVQFNGLLLRFHQHLDTTGAHIV
GPLLFNWCIDKWTPD*
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