prot_P-littoralis_Contig171.64.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig171.64.1
Unique Nameprot_P-littoralis_Contig171.64.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig171.64.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.830e-18
Identity = 79/218 (36.24%), Postives = 114/218 (52.29%), Query Frame = 0 
Query:    3 SGDAQRARDVAK-FGDRPDDWINPFSLAFVLFGRPAGEQEDVDLKCKVSGGGKTGAAATAAVEPGGAGVGSAAKAHG------LGRHDLANLDGAGGGAGGQQSRAAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPAQSSESSKRLALSVETLTRTAVLRQRLAEEGAEERRWTFRKGAKESHIAHLEKMGKINTEQWDRAQEELLEILSNP 213
            +GDA+   D+ + +G +P+ W++P SL F +FGRPAG  EDVDLK K++ G  +G                            L    L  ++    GAGG+ SRA +K   H  N+E K+ + ++A A  +  AL+A++ P + S+SS  L  SV+ LTR  V ++ L +E AE  RW  R  A ES +A   KMGK +T +    QEELL    NP
Sbjct:  270 AGDAETEDDLTRLYGPKPEHWLHPASLVFAIFGRPAGTNEDVDLKLKMTSGRPSGTKXXXXXXXXXXXXXXXXXXXEDESKPCLSTKGLKLMN----GAGGKHSRAEMKTLAHEVNAENKKLKGAEADAVLKRRALEALSTPPEDSKSSLELVESVKALTRAVVSKELLDQEQAERARWNERVRAMESKLALWGKMGKGSTAEAQALQEELLHAYDNP 483
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE1.830e-1836.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:183158..183826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.64.1mRNA_P-littoralis_Contig171.64.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig171 183088..183826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig171.64.1 ID=prot_P-littoralis_Contig171.64.1|Name=mRNA_P-littoralis_Contig171.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
GASGDAQRARDVAKFGDRPDDWINPFSLAFVLFGRPAGEQEDVDLKCKVS
GGGKTGAAATAAVEPGGAGVGSAAKAHGLGRHDLANLDGAGGGAGGQQSR
AAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPAQSSESSKRLALS
VETLTRTAVLRQRLAEEGAEERRWTFRKGAKESHIAHLEKMGKINTEQWD
RAQEELLEILSNPPAQRRRQLR*
back to top