prot_P-littoralis_Contig171.115.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig171.115.2
Unique Nameprot_P-littoralis_Contig171.115.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length544
Homology
BLAST of mRNA_P-littoralis_Contig171.115.2 vs. uniprot
Match: D7G1W1_ECTSI (Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W1_ECTSI)

HSP 1 Score: 494 bits (1273), Expect = 5.960e-167
Identity = 289/502 (57.57%), Postives = 330/502 (65.74%), Query Frame = 0
Query:    1 MVAADMGHLKDTAS---HITTENMRQQSKDLAAVMDQLGPTGSRPSTTLTTTNDQHAGVSVGGCTDNRQRKXXXXXXXXXXXXXXXXXXXXXXDQQKIATTAVGSMPGSTGGKIRSGAVGVAVGV------GVSDGRKIEAKAPTGGTANGXXXXXXXXXXXXXXXXXXA-----AAAVWNAYQRGKWFKGQWIPKVLLDATSPDLSELV--GSSQRRVLIMSEKRSGGQAMGGILNADPRVFYVADPCRMGGGPEALDAGACSLSISRLLACQPTINDIRNLFSFSYIVERSRVLSAFESLRWEAGGTSEENDEGVRAAVGRQCRQSSVVVVKETRLAEVAPRLSMAELGVEFLHIVRDPRAAIHGMAKLWQTSNNMIDRFMAEDCSDVASRVCLSTENKLKGLTGLGKQRFRVLKYEMVADAIRSVYTRGPTEPSPGTA-SWRGAKTTLGRIEWATRWAVEMPAFRRQQVQNACQSILEALGYDQPDPSEEXXXXXQDAG 485
            MVAADMGHLKDT     HI  E M Q  KDLAAV+ QLG    RPS +      +   +   G T+N+ R                       DQ ++A        GS  G+  +  +G   GV      G ++   +    PT G A G                  A       AVWNAYQRGKW  GQW+PKVL D TSPDLS+L   G  QRRVL++SEKRSGG A+GG+LNAD RVFYVADPCRMGGGPEALDAGACSL+++RLLACQPT NDIRNLFSFSYIVERSRVLS  E LRW+A GT +ENDE  RAAV RQCR SSVVVVKETRLAEVAPRLS  EL +EFLHIVRDPRAAIHGMA+LW+ S+N ++R MA DCSDVASR+C S ENKLK LT LGKQRFRVLK+EMV +AIRS   R   E SPGTA +  G+K+T+G  +WATRWAVEMP FRRQQVQ AC  +L ALGYD P+  EE     QDAG
Sbjct:    1 MVAADMGHLKDTVEKLDHIVRETMGQHGKDLAAVLVQLGL--ERPSRSNLVAGSESRPMPAEGLTNNKAR--------GATPAWPSPLQQAPQDQLQLAG-------GSRQGQGDASVLGAGGGVDHVAVRGTAEDGSLAGGGPTTGKALGRDTQGNGKGAAGGLTEEGARGAAEGVAVWNAYQRGKWVNGQWVPKVLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGGHAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVERSRVLSESEGLRWQAEGTPDENDEETRAAVIRQCRLSSVVVVKETRLAEVAPRLSTPELDLEFLHIVRDPRAAIHGMAELWEKSDNKMERSMARDCSDVASRLCTSAENKLKFLTLLGKQRFRVLKHEMVTEAIRSTSMRSSAENSPGTAVAGNGSKSTMGGFDWATRWAVEMPTFRRQQVQLACHPLLVALGYDDPEDPEEQ----QDAG 481          
BLAST of mRNA_P-littoralis_Contig171.115.2 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.510e-13
Identity = 73/281 (25.98%), Postives = 118/281 (41.99%), Query Frame = 0
Query:  198 SSQRRVLIMSEKRSGGQAMGGILNADPRVFYVADPCRMGG-GPEALDAGACSLSISRLLACQPTINDIRNLFSFSYIVERSRVLSAFESLRWEAGGTSEENDEGVRAAVGRQCRQSSVVVVKETRLAEVAPRLSMAELGVEFLHIVRDPRAAIHGMAKLWQTSNNMIDRFMAEDCSDVASRVCLSTENKLKGLTGLGKQRFRVLKYEMVADAIRSVYTR-------GPTEPSPGTASWRGAKTTLGRIEWAT--RWAVEMPAFRRQQVQNACQSILEALGY 468
            + Q+R+LI+SE RSG    G + N++ ++FY+ +PC+ GG G  AL   AC   + RLL C+PT+ D+ N+F                                       + RQS+ VVVKE R   V   + M     + +H+VRDPR A+     LW+  +  ++    E         C  T  K+     L + +  V+K E +A  + +  T+       GP  P    A     ++  G  E++    +   +    + +V  AC   +  LGY
Sbjct:  245 AEQKRLLIVSEPRSGSTQFGELFNSNEQLFYLFEPCKGGGDGGTALYDEACGYLLQRLLECEPTVKDVDNMF---------------------------------------RDRQSAGVVVKEIRTVGV--HVDMLPRATKVMHLVRDPRDAMLSALALWRGQDGGLEFQSGE--------FCRRTMAKITSTDALPEGQRMVIKLEQLAADVFTTMTKMHRWAELGPINPDVQKA----IRSLEGDDEFSRVGAYVKGLTGAEQGEVTAACTEPMAHLGY 472          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.115.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W1_ECTSI5.960e-16757.57Carbohydrate (N-acetylglucosamine 6-O) sulfotransf... [more]
A0A835ZGF5_9STRA2.510e-1325.98HEAT repeat-containing protein 1 n=1 Tax=Tribonema... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 196..486
e-value: 6.0E-15
score: 57.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 177..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..104
NoneNo IPR availablePANTHERPTHR10704CARBOHYDRATE SULFOTRANSFERASEcoord: 62..407

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:404260..411455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.115.2mRNA_P-littoralis_Contig171.115.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig171 404260..411455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig171.115.2 ID=prot_P-littoralis_Contig171.115.2|Name=mRNA_P-littoralis_Contig171.115.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=544bp
MVAADMGHLKDTASHITTENMRQQSKDLAAVMDQLGPTGSRPSTTLTTTN
DQHAGVSVGGCTDNRQRKQHQHHQQQLHAQQNRPPSTGGNDQQKIATTAV
GSMPGSTGGKIRSGAVGVAVGVGVSDGRKIEAKAPTGGTANGEGQGGGGQ
GAGESRQGEGAAAAVWNAYQRGKWFKGQWIPKVLLDATSPDLSELVGSSQ
RRVLIMSEKRSGGQAMGGILNADPRVFYVADPCRMGGGPEALDAGACSLS
ISRLLACQPTINDIRNLFSFSYIVERSRVLSAFESLRWEAGGTSEENDEG
VRAAVGRQCRQSSVVVVKETRLAEVAPRLSMAELGVEFLHIVRDPRAAIH
GMAKLWQTSNNMIDRFMAEDCSDVASRVCLSTENKLKGLTGLGKQRFRVL
KYEMVADAIRSVYTRGPTEPSPGTASWRGAKTTLGRIEWATRWAVEMPAF
RRQQVQNACQSILEALGYDQPDPSEEEEEQQQDAGPESPSTQELGVVSST
GSLDSVKTYATNAEAVASSGVGHSGGGGGGGGGNASGSSVASSA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase