prot_P-littoralis_Contig17.228.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.228.1
Unique Nameprot_P-littoralis_Contig17.228.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length111
Homology
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BLAST of mRNA_P-littoralis_Contig17.228.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.340e-34
Identity = 72/111 (64.86%), Postives = 81/111 (72.97%), Query Frame = 0 
Query:    1 MWAVVGSRSKSSS--SLCGKSGNTSVDVVEQSGFGLSLIDRIVDYHPYRILGSALFSCPRRHHLPGSNTATRRSGVLLRAVGETLVADSLFFLRFPCLPRLWKMVCRLGYF 109
            MW VVGSRSKSSS   LCG +G T VD +EQSGFGLSLIDRIVD+HPY +LG ALFS P  HHLPGS+ ATRRS V++RAVGETLV DSLF L        W+    +G F
Sbjct:  291 MWVVVGSRSKSSSLMRLCGMAGYTPVDRLEQSGFGLSLIDRIVDHHPYSLLGRALFSYPHGHHLPGSDEATRRSWVMVRAVGETLVVDSLF-LALSLSSETWEDGVSIGIF 400
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFA4_9PHAE3.340e-3464.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:973839..974171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.228.1mRNA_P-littoralis_Contig17.228.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 973236..975522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.228.1 ID=prot_P-littoralis_Contig17.228.1|Name=mRNA_P-littoralis_Contig17.228.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=111bp
MWAVVGSRSKSSSSLCGKSGNTSVDVVEQSGFGLSLIDRIVDYHPYRILG
SALFSCPRRHHLPGSNTATRRSGVLLRAVGETLVADSLFFLRFPCLPRLW
KMVCRLGYFR*
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