prot_P-littoralis_Contig17.158.14 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.158.14
Unique Nameprot_P-littoralis_Contig17.158.14
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length577
Homology
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: D7FK25_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK25_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.490e-47
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 0
Query:  357 ATKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLCLVGPRPSVSMFMGSVAQTAFCGLMVGI 503
            AT +LL +N + FL QQ DPS+T  F +LAYAITD GEWY             HL  NSMAL++IG   ET +GT +FV LY+CSGV+GNVLSCIV PLTPSLGASGA+FGLLGAEA++ L GP+ S+ +F+ SV QTAF  ++VG+
Sbjct:   79 ATNALLVINFLVFLQQQQDPSVTTSFYKLAYAITDHGEWYXXXXXXXXXXXXGHLAGNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCIVDPLTPSLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQTAFFAVLVGL 225          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: A0A6H5L1Y9_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y9_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 3.240e-47
Identity = 86/147 (58.50%), Postives = 110/147 (74.83%), Query Frame = 0
Query:  357 ATKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLCLVGPRPSVSMFMGSVAQTAFCGLMVGI 503
            AT +LL +N + FL QQ DPS+T  F  LAYAITD GEWYRL+         +HL +NSMAL++IG   ET +GT +FV LY+CSGV+GNVLSCIV PL+ SLGASGA+FGLLGAEA++ L GP+ S+ +F+ SV QTAF  ++VG+
Sbjct:  181 ATNALLVINFLVFLQQQQDPSVTTSFYNLAYAITDHGEWYRLVXXXXXXXXXVHLASNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCIVDPLSASLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQTAFFAVLVGL 327          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: D7FK43_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK43_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 7.390e-36
Identity = 72/151 (47.68%), Postives = 101/151 (66.89%), Query Frame = 0
Query:  357 ATKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLCLVGP----RPSVSMFMGSVAQTAFCGLMVGI 503
            AT  LLALN + +L Q   P+IT    ++A AIT  G+WYRL+TP++LHGS+ HL  NSM+  S+GP VE  +G  +FV +Y  +G+AGNVLSCIV+P TPS+GASGA+FG++GA    CL+      R +    + +VAQT    ++ G+
Sbjct:   59 ATNVLLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGM 209          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: A0A6H5JA75_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA75_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.110e-35
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 0
Query:  357 ATKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLCLVGP----RPSVSMFMGSVAQTAFCGLMVGI 503
            AT +LLALN + +L Q   P+IT    ++A AIT  G+WYRL+TP++LHGS+ HL  NSM+  S+GP VE  +G  +FV +Y  +G+AGNVLSCIV+P TPS+GASGA+FG++GA    CL+      R +    + +VAQT    ++ G+
Sbjct:  221 ATNALLALNAIVYLFQMRYPAITKAGWKMAPAITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTVAGIAGNVLSCIVNPRTPSVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINVVYGM 371          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: A0A7C6PNH9_9FIRM (Rhomboid family intramembrane serine protease n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6PNH9_9FIRM)

HSP 1 Score: 107 bits (266), Expect = 1.030e-22
Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 0
Query:  356 AATKSLLALNLVAFLMQQHDPSITARF-CQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLCLVGPRPSV 484
            +AT  L+A+NL  F+       +  +F  +   AI   G++YRL+T + LH    HL+ N  ALY +GPA+E  LG +RF +LY+ SGV GN+LS  + PL PSLGASGA+FGLLG    L L  PRPS+
Sbjct:   16 SATNLLIAINLAVFITDFILGGVLTQFGLKFGPAIWQ-GQYYRLVTALFLHAGIFHLLFNLYALYYLGPALEIGLGRHRFWLLYLLSGVTGNLLSLRLAPLAPSLGASGAIFGLLGYYLYLSLALPRPSL 144          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: A0A7S1H9N4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9N4_HEMAN)

HSP 1 Score: 103 bits (256), Expect = 8.980e-22
Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 0
Query:  358 TKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLC-----LVGPRPSVSMFMGSVAQTAFCGLMVGI 503
            TK+LLA+N+  F  Q            +  +    G++YRL TP+ LHGS+ HL+ N  +L ++GP VE   G +R  V+Y+ SGVAGNVLSC++     S+GASGA+FGL+GA  V       ++G    V++   S+ QT F  + +G+
Sbjct:   17 TKALLAVNVAVFFAQTLSQGALTLAGAMVSSDIAAGQYYRLFTPMFLHGSFNHLLVNCFSLNAVGPQVEALYGLDRMSVVYLASGVAGNVLSCMMSS-HMSVGASGAIFGLVGALGVFLARHQEMLGGGSKVAL--SSIGQTIFLNMALGL 164          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: R7Q8K5_CHOCR (Rhomboid domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K5_CHOCR)

HSP 1 Score: 103 bits (258), Expect = 1.820e-20
Identity = 60/127 (47.24%), Postives = 85/127 (66.93%), Query Frame = 0
Query:  361 LLALNLVAFLMQQ-HDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLC-----LVGPR 481
            LLALN+  F +Q    P++  R  ++  AIT  G++YRL +P+ LH S  HL+ NS +L+S GP+VE+  G  RF+ LY+ SGV+GNVLS    P TP++GASGA+FGL+GA  V+      ++GPR
Sbjct:  156 LLALNVGVFALQTLMGPNVLMRGAKVNSAITA-GQYYRLFSPMFLHASVSHLLVNSFSLHSTGPSVESWFGKPRFLSLYIASGVSGNVLSYFCSP-TPAVGASGAIFGLVGASLVVLGRHRQILGPR 280          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: UPI001C38A55E (rhomboid family intramembrane serine protease n=1 Tax=Streptomyces corallincola TaxID=2851888 RepID=UPI001C38A55E)

HSP 1 Score: 102 bits (253), Expect = 2.680e-20
Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 0
Query:  358 TKSLLALNLVAFLMQQH-DPSITARFCQLAYAIT-DL--------GEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVH-PLTPSLGASGALFGLLGAEAVL 475
            TK L+ LNLV FL+QQ    S T RF  L  A+T DL        G++YRL+T + LHGS+LH++ N ++L+ +G  +E  LG  R++ LY+  G+AG+ L  ++  P  PSLGASGA+FGL GA AVL
Sbjct:   87 TKVLIGLNLVLFLVQQAVGDSFTDRFDVLGRALTPDLLGLQGIAEGQYYRLLTGMFLHGSYLHILFNMLSLWWVGGPLEAALGRARYIALYLVCGLAGSALCYLLAAPNQPSLGASGAIFGLFGATAVL 215          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: UPI001677027A (rhomboid family intramembrane serine protease n=2 Tax=Streptomyces TaxID=1883 RepID=UPI001677027A)

HSP 1 Score: 101 bits (251), Expect = 5.110e-20
Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 0
Query:  342 GGTPDGNHDRGVVGAA--------TKSLLALNLVAFLMQQH-DPSITARFCQLAYAITDL-----------GEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIV-HPLTPSLGASGALFGLLGAEAVL 475
            G  PD +  R + G A        TK L+ LNL  FL+QQ    + T RF  +  AI              G+WYRL+T + LH S++H+++N ++L+ IG  +E  LG  RF+ LY+ SG+AG+ LS ++  P   SLGASGA+FGL GA AVL
Sbjct:   63 GHAPDASMPRTLAGGAVTADPHLVTKVLIGLNLAVFLLQQALGDTFTDRFDLIGRAIMPALGLGEIQGVAEGQWYRLLTSMFLHASYIHILSNMLSLWWIGGPLEAALGRVRFLALYLVSGLAGSALSYLLAEPNQASLGASGAIFGLFGALAVL 217          
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Match: A0A8J9RUQ7_9CHLO (RHOMBOID-like protein 10, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RUQ7_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 5.490e-20
Identity = 62/151 (41.06%), Postives = 84/151 (55.63%), Query Frame = 0
Query:  358 TKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMTPVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSCIVHPLTPSLGASGALFGLLGAEAVLC-----LVGPRPSVSMFMGSVAQTAFCGLMVGI 503
            T  LL LN  AF+ Q                +   GEW+RL+TPV LH SWLHL+ N+ +L S+GPAVE   G  RFV +Y  S + G+V S  ++P +PS+GASGA+FGL GA AV       L+G R      + S+ Q+    L +G+
Sbjct:  103 TDFLLVLNAAAFIAQIVSKDRLLLLGAKDNQLIRAGEWWRLITPVALHASWLHLLTNNYSLNSLGPAVEGLCGRQRFVSVYTASALMGSVASYALNP-SPSVGASGAIFGLGGALAVYAARHRKLMGSRGDA--ILQSLGQSLILNLAIGL 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.158.14 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK25_ECTSI1.490e-4758.50Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L1Y9_9PHAE3.240e-4758.50Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
D7FK43_ECTSI7.390e-3647.68Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JA75_9PHAE9.110e-3547.68Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A7C6PNH9_9FIRM1.030e-2246.92Rhomboid family intramembrane serine protease n=1 ... [more]
A0A7S1H9N4_HEMAN8.980e-2239.07Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
R7Q8K5_CHOCR1.820e-2047.24Rhomboid domain-containing protein n=1 Tax=Chondru... [more]
UPI001C38A55E2.680e-2047.29rhomboid family intramembrane serine protease n=1 ... [more]
UPI001677027A5.110e-2041.29rhomboid family intramembrane serine protease n=2 ... [more]
A0A8J9RUQ7_9CHLO5.490e-2041.06RHOMBOID-like protein 10, chloroplastic n=1 Tax=Co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 392..530
e-value: 2.4E-35
score: 121.7
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 354..532
e-value: 3.9E-38
score: 133.0
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 357..530
NoneNo IPR availablePIRSRPIRSR037023-1PIRSR037023-1coord: 389..521
e-value: 9.7E-23
score: 78.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..352
NoneNo IPR availablePANTHERPTHR43731RHOMBOID PROTEASEcoord: 146..537
NoneNo IPR availablePANTHERPTHR43731:SF14PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIALcoord: 146..537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:703584..714531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.158.14mRNA_P-littoralis_Contig17.158.14Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 703448..714845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.158.14 ID=prot_P-littoralis_Contig17.158.14|Name=mRNA_P-littoralis_Contig17.158.14|organism=Pylaiella littoralis U1_48|type=polypeptide|length=577bp
MYGGGNTPPRSLLLARNVTCSFLRARRSAAAAASVSAPKQAARLLAARPL
LGAGRSSSSSSCWFSRCCRSSGRFRRGGASGASFPPIIVSGVGTRRSSSS
TAATAAATASPPDAAAAATDGVAAGADSSKHWRQTRGGTLLLATTGTAYN
SLQRKASAAAAEAAAAAAATAAATAAATASEVSTRSYRQLQQKQQPPERT
ATTALAALLRDARGQFSGGGFSGGGLGDQLPRRSDGGLGRSWGWRGVIGG
GGKGDGETFEWMKGVEKEDHDGQEGNVVNLATPRAACFPPSPPPPSHQGQ
VMMSNSRSGFGVPPKGTSSGRGRAVRVRKRLDGPDGQLPPAGGTPDGNHD
RGVVGAATKSLLALNLVAFLMQQHDPSITARFCQLAYAITDLGEWYRLMT
PVMLHGSWLHLMANSMALYSIGPAVETRLGTNRFVVLYMCSGVAGNVLSC
IVHPLTPSLGASGALFGLLGAEAVLCLVGPRPSVSMFMGSVAQTAFCGLM
VGILVPNIDHMGHLGGFLGGAAVTALIGPRSARYVQRYAVKKTSALSHFY
NNMYVPLPSNRKGGKDRQKAGSSPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf