prot_P-littoralis_Contig168.84.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig168.84.2
Unique Nameprot_P-littoralis_Contig168.84.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length490
Homology
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BLAST of mRNA_P-littoralis_Contig168.84.2 vs. uniprot
Match: A0A6H5L7M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M1_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 4.660e-82
Identity = 185/221 (83.71%), Postives = 195/221 (88.24%), Query Frame = 0 
Query:    1 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKESELKELRTTADKADKEKAANSTVKGADGTVPKAPVGGXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEKAYEYIEQLEEEREVHSNKVYALEEKIRSVASQPDPYDQ 221
            MADSKR RISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKE+ELKELRTTADKADK+K   +  K             XXXXXXXXXXXXXXXXXXXXXXX CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALE+AYEYIE+LEEERE+HS KVYALEE++R VA  P  +D+
Sbjct:    1 MADSKRARISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGTGAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREMHSTKVYALEEELRLVA--PGSHDE 219
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BLAST of mRNA_P-littoralis_Contig168.84.2 vs. uniprot
Match: D7FZA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA5_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.180e-80
Identity = 188/222 (84.68%), Postives = 197/222 (88.74%), Query Frame = 0 
Query:    1 MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKESELKELRTTADKADKEKAANSTVKGADGTVPKAPVGGXXXXXXXXXXXXXXXXXXXXXXXX-CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEKAYEYIEQLEEEREVHSNKVYALEEKIRSVASQPDPYDQ 221
            MADSKRVRISKREGALMARLSAKEQE+YEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKE+ELKELRTTADKADK+K   +                XXXXXXXXXXXXXXXXXXXXXXXX CQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALE+AYEYIE+LEEEREVHS KVYALEE++R VASQP  + Q
Sbjct:    1 MADSKRVRISKREGALMARLSAKEQEIYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKEAELKELRTTADKADKDKGKGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQRLEQENEELAASADVAKVAQLTSEKAVAEAYAGELKTALEEAYEYIEKLEEEREVHSTKVYALEEELRLVASQPHLHGQ 222
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BLAST of mRNA_P-littoralis_Contig168.84.2 vs. uniprot
Match: A0A836CAD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD3_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.790e-11
Identity = 38/80 (47.50%), Postives = 58/80 (72.50%), Query Frame = 0 
Query:    3 DSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQVYTDPAINVEFQLLTAQLAEMENSLRLKESEL 82
            + K+ R++ REGA+M RL+AK+ ++ ++Q+   DL  ++ P  DF RQ +TDPA+NVEFQL+ +QL EME  LR  E++L
Sbjct:    5 EPKKARLTAREGAMMMRLAAKDADMADMQSYVVDLAVSKTPSVDFTRQHFTDPAVNVEFQLMRSQLVEMEKKLRTAEAQL 84
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig168.84.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7M1_9PHAE4.660e-8283.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA5_ECTSI1.180e-8084.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAD3_9STRA3.790e-1147.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..95
NoneNo IPR availableCOILSCoilCoilcoord: 134..161
NoneNo IPR availableCOILSCoilCoilcoord: 174..208
NoneNo IPR availableCOILSCoilCoilcoord: 255..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..458
NoneNo IPR availablePANTHERPTHR15217:SF0PRE-MRNA-SPLICING REGULATOR WTAPcoord: 136..267
NoneNo IPR availablePANTHERPTHR15217:SF0PRE-MRNA-SPLICING REGULATOR WTAPcoord: 9..82
IPR033757Pre-mRNA-splicing regulator WTAPPFAMPF17098Wtapcoord: 8..202
e-value: 1.2E-57
score: 194.3
IPR033757Pre-mRNA-splicing regulator WTAPPANTHERPTHR15217WILMS' TUMOR 1-ASSOCIATING PROTEINcoord: 9..82
IPR033757Pre-mRNA-splicing regulator WTAPPANTHERPTHR15217WILMS' TUMOR 1-ASSOCIATING PROTEINcoord: 136..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig168contigP-littoralis_Contig168:453631..467697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig168.84.2mRNA_P-littoralis_Contig168.84.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig168 453558..467872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig168.84.2 ID=prot_P-littoralis_Contig168.84.2|Name=mRNA_P-littoralis_Contig168.84.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=490bp
MADSKRVRISKREGALMARLSAKEQEVYEVQASARDLYRARRPVTDFARQ
VYTDPAINVEFQLLTAQLAEMENSLRLKESELKELRTTADKADKEKAANS
TVKGADGTVPKAPVGGGKSGEGGGAKGESTAARASALVARCQRLEQENEE
LAASADVAKVAQLTSEKAVAEAYAGELKTALEKAYEYIEQLEEEREVHSN
KVYALEEKIRSVASQPDPYDQQQQQHHQQQQQQQRHHHNQHQHQRDQQQQ
QHHHLNQHQHQRDQQQQQHHQQEQQQQQHHQQEEEEEEEQQQQQRQRQDY
HSASPPNPLAAPGEGEGEPSWSEDIHHRQHQQHQEREGGQREGGGGRMDI
SSASGSDAQPPPPPPPPPPPQPDAESETAAAAGDDMDDLYGDMGDAVEAA
YSPGEGEGTEGPVVKDDPMRRSRSRSRSRNQNQKGGRKPLQRPRELDQRD
DQQEAAESRRKLPFSSSNHGAHRAVGSPFMVVRDQASRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033757WTAP