prot_P-littoralis_Contig166.85.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.85.1
Unique Nameprot_P-littoralis_Contig166.85.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length550
Homology
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 8.660e-152
Identity = 243/337 (72.11%), Postives = 275/337 (81.60%), Query Frame = 0
Query:   29 MSSLTDPQATGILPASVAVPKARQRRSSSSVNNATATMRVSLSDVVNMHGKERQSEAKARIQSAEAIRKQRRKSSLLQMGVASAVMKDVASEVLKENTVAVLEAAGDVSPVEKLQALLTKAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEIELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRHDMMLNNAESKDELNVAARRIARRRSSMRAIPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITISTRCPERAYNYPAIFVDVAKIPVHKSEAVERANSVGQFEAMNKEERQEATDIAMSSLRTEYLQHR 365
            M+SL+DP+ TG+   S AVP+ARQRRSSSS+NNATATMRVS+S VVN++GK+ Q   K R +SA                               +   A +EAAGDVSPVEKLQ LLTKAKE+GMSAERLFEHFAP GEASVTP MFE+ALRKLGQRAFDLDE+ELEHLVT FDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR    LNNAESKDELNVAAR+IARRRSS+RA+PIG L++QGSRFFWRSKETIDVA H N+DEGL+TISTRCPER YNYPAIFVDV+KIPVHK+EAV RAN+VGQFE+M+K+ER+EATD AM++LR EYLQHR
Sbjct:    1 MASLSDPKGTGMESPSAAVPRARQRRSSSSINNATATMRVSVSGVVNVNGKDSQEAEKNRRESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAAVEAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGGEASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR----LNNAESKDELNVAARKIARRRSSLRAVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAVGQFESMSKDERREATDKAMTALRVEYLQHR 333          
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.000e-59
Identity = 151/433 (34.87%), Postives = 213/433 (49.19%), Query Frame = 0
Query:  137 SPVEKLQALLTKAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEIELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRHDMMLNNAESKDELNVAARRIARRRSSMRAIPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITISTRCPERAYNYPAIFVDVAKIPV---------------------------HKSEAVERANSVGQFEAMNKEERQEATDIAMSSLRTEYLQHRLKVPDEVNGGPDGREKEGRERASPMETKKDTAFDSSDEEQDGRQHKSGRGEHATAKGGGAVVVPDGGLGSSMVVPWTTKPGEMTPQDRANDKSRHRRKSNPIHSRPFLARLSTDKWDSLLCARNIVLQTPHRFETAARRSSMADFRRASLQFEQLAKETEKLSSVAEHKSRKVEKSI 542
            +P+EKLQALLT AKE+GMSAERLFE FAP G A++T   FE ALR+L  + F L   EL+ L+  FD + NG +EL EFM FC++IPSL W+AE+ARR    ++  +  + L  AAR   RRRS+ +A+ +G  ++    FFWRS++ +DV  H N  EG++ ISTR  +R   +P IFV+ ++IP+                           H ++  +R     Q E ++ +ER E  +     L +EYL +RLKVPD+ N  P                                      G  A AK       P     ++M                                 PFL RLSTD   S+LC R +++  P+RF TA RR S+ DFRRASL+ ++L  ET  L  VAE K+ +  +++
Sbjct:   29 TPLEKLQALLTAAKERGMSAERLFEFFAPAGSATMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARR----MSAVDGPEALTEAARNSERRRSTCKAVDLGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIARAQINKAVDDKELSVVDKRQAFPPQSHHAQIAKRQEGSRQ-EPISTQERAELYEATRKELISEYLLNRLKVPDDANKPP--------------------------------------GLSAAAKSPKRSTSPKSVAAAAMAA-----------------------------EAPFLQRLSTDGAGSVLCTRGLMVSKPYRFPTA-RRGSVDDFRRASLELQRLVGETSGLIDVAEAKAEEAGRTV 388          
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.900e-17
Identity = 74/259 (28.57%), Postives = 124/259 (47.88%), Query Frame = 0
Query:  133 AGDVSPVEKLQALLTKAKEKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEIELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR---------HDMMLNNAESKDELNVAARRIARRRSSMRA------IPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITISTRCPERAYNYPAIFVDVAKIPVHKSEAV-ERANSV-----GQFEAMNKEERQEATDIAMSSLRTEYLQHRLKVPD 370
            + D +PVE +++++ + KE G +  +LF  F                                   + TFDTDG+GT+EL EF+ +CL I ++ W+AE+ RR         H    +     DE   AA R+A   +  +        P+G L+Y+GS+ FWR+ E++ +A H N ++  I IST     +  +P + VD   I V+  +AV ER   +     G+ + + ++ R +  D A +S+ ++YL  RLK+ D
Sbjct:  103 SNDSTPVEAMRSIMVRGKEHGWTTSQLFGVF-----------------------------------LETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDE---AAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLID 323          
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.190e-13
Identity = 72/226 (31.86%), Postives = 108/226 (47.79%), Query Frame = 0
Query:  171 VTPAMFETALRKLGQRAFDLDEIELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRHDMMLNNAESKD-ELNVAARRIARRRSSMR----------------AIPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITISTRCPERAYNYPAIFVDV-AKIPVHKSE-AVERANSVGQFEAMNKEER--QEATDIAMSSLR-----TEYLQHRLKVPD 370
            +T A F+  L  LG   F++   E   +    D +G+G+++L EF  FCL IPS+ W+AE+ARR  +  N  E  D EL  AAR +A    S                   + +G + Y+G +FFWR+K+ I+V    N  +G + I    P  A     I  D+ AK    K+E A+  + S G     NKE+   Q+  D A+S         +Y+ HR+ +PD
Sbjct:  297 ITSASFQHGLATLG---FNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAI----PASAAAEAEILNDLKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHRITMPD 515          
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN)

HSP 1 Score: 79.3 bits (194), Expect = 3.660e-12
Identity = 39/92 (42.39%), Postives = 61/92 (66.30%), Query Frame = 0
Query:  146 LTKAKEKGMSAERLFEHFAPDG---EASVTPAMFETALRKLGQRAFDLDEIELEHLVTTFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR 234
            ++ AKEKG+  +++F++F  +G   +  +TP  FE A++KLG   + +   EL  L+  FD D NGTV ++EF+ +CL IP+L W+AEK RR
Sbjct:    1 MSNAKEKGLRVDQIFKYFKSEGAGDDDDITPDDFEAAMKKLG---WSISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLRR 89          
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Match: A0A7S2D074_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D074_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.550e-6
Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = 0
Query:  137 SPVEKLQALLTKAKEKGMSAERLFEHFAPD-GEASVTPAMFETALRKL--GQRAFDLDEIELEHLVTTFD----TDGNGTVELDEFMTFCLSIPSLPWRAEKARRHD----MMLNNAE------SKDELNVAARRIARRRSSMRAIPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITISTRCPERAYNYPAIFV--DVAKIPVHKSEA 328
            SPVEKL  +++KAKE G S E +F  F  + GE +     FE  L+KL  GQ A D D+   +     FD       NG V+L EF  + L + ++ W+AE+ R+ +     +LN A       S DE+      + +  +          +Y G +FFWRS+  +++ +        I ++    +   N   IF+  D   +   +SEA
Sbjct:   93 SPVEKLDLIMSKAKESGKSYEAIFNEFRHENGEINFED--FEIGLKKLIKGQTA-DPDDTATKEFRVMFDYLDDNQSNG-VDLKEFQEYALKMKNVSWKAERIRQSNDFPGSLLNKAVVNPATFSNDEIKTKTCVVDKHHTDTITE-----VYHGPKFFWRSQTKLELVFTQYEITNCIVVTAFHEKLQVNLDPIFLKSDQIMLVAARSEA 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSJ9_ECTSI8.660e-15272.11EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA2.000e-5934.87EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D8LCP2_ECTSI2.900e-1728.57EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G5R3_ECTSI1.190e-1331.86EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
F0XWQ4_AURAN3.660e-1242.39EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
A0A7S2D074_9STRA1.550e-628.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availableGENE3D1.10.238.10coord: 48..239
e-value: 1.8E-11
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..417
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 170..218
e-value: 3.8E-8
score: 33.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 190..225
score: 10.775421
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 203..215
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 157..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:367105..379256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.85.1mRNA_P-littoralis_Contig166.85.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 367105..379256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.85.1 ID=prot_P-littoralis_Contig166.85.1|Name=mRNA_P-littoralis_Contig166.85.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp
APQGYKIPQPRDPKKQRKGGEKTSNWGEMSSLTDPQATGILPASVAVPKA
RQRRSSSSVNNATATMRVSLSDVVNMHGKERQSEAKARIQSAEAIRKQRR
KSSLLQMGVASAVMKDVASEVLKENTVAVLEAAGDVSPVEKLQALLTKAK
EKGMSAERLFEHFAPDGEASVTPAMFETALRKLGQRAFDLDEIELEHLVT
TFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRHDMMLNNAESKDELNV
AARRIARRRSSMRAIPIGILLYQGSRFFWRSKETIDVAYHYNSDEGLITI
STRCPERAYNYPAIFVDVAKIPVHKSEAVERANSVGQFEAMNKEERQEAT
DIAMSSLRTEYLQHRLKVPDEVNGGPDGREKEGRERASPMETKKDTAFDS
SDEEQDGRQHKSGRGEHATAKGGGAVVVPDGGLGSSMVVPWTTKPGEMTP
QDRANDKSRHRRKSNPIHSRPFLARLSTDKWDSLLCARNIVLQTPHRFET
AARRSSMADFRRASLQFEQLAKETEKLSSVAEHKSRKVEKSINNIAEAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair