prot_P-littoralis_Contig166.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig166.38.1
Unique Nameprot_P-littoralis_Contig166.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length230
Homology
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BLAST of mRNA_P-littoralis_Contig166.38.1 vs. uniprot
Match: A0A6H5K6V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V4_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.860e-13
Identity = 80/216 (37.04%), Postives = 95/216 (43.98%), Query Frame = 0 
Query:    1 MGASPYASPLPYGEWALSLVILVGGFYWVRAEETATKCRTRDSGPAGRRQTAEGENKEQQEQEDGAWGGRTSSSAYQTDYEADRMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFPVTRAAVDATRAVEKSHLDYVVDRADRWRLEKEAFRIRVQQHVGRELDR 216
            M  SPYA PLPYG WALSL IL+GGF+W RAE  +    +   G A RRQT EG+ +EQ E+   A   RTSS                         XXXXXXXXXXXXXXXXX                                                   F           A  K H ++VV+  DRWRLE+EAFR++V +HV REL+R
Sbjct:    1 MSLSPYARPLPYGGWALSLTILLGGFFWARAEGISVAGSSHRDGQANRRQTQEGDEEEQPEETRSAH--RTSSXXX----------------------XXXXXXXXXXXXXXXXXRRYSNQRSLFARVRPTPLSLTPPLPWQTTAAAVDGEETYIRRDAAPAALSGFCAXXXXXXXXXATRKPHFNHVVEPTDRWRLEREAFRVKVHEHVDRELER 192
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BLAST of mRNA_P-littoralis_Contig166.38.1 vs. uniprot
Match: D8LSI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.070e-6
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:  177 TRAVEKSHLDYVVDRADRWRLEKEAFRIRVQQHVGRELDR 216
            T A+ KSH  +VV+R DRW LE+EAFR++V +HVGREL R
Sbjct:   94 TSAIRKSHFSHVVERTDRWCLEREAFRVKVHEHVGRELAR 133
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6V4_9PHAE1.860e-1337.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI9_ECTSI1.070e-662.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig166contigP-littoralis_Contig166:237816..239828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig166.38.1mRNA_P-littoralis_Contig166.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig166 237741..240776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig166.38.1 ID=prot_P-littoralis_Contig166.38.1|Name=mRNA_P-littoralis_Contig166.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=230bp
MGASPYASPLPYGEWALSLVILVGGFYWVRAEETATKCRTRDSGPAGRRQ
TAEGENKEQQEQEDGAWGGRTSSSAYQTDYEADRMQQQNHQQQHIVGRRH
DNRQNNLLMAIRAGLSSPPTLLCGAEQTAAVAGGEECANQTRASSPSAAA
AAALEVEAAAASSGGAFPVTRAAVDATRAVEKSHLDYVVDRADRWRLEKE
AFRIRVQQHVGRELDRKNRRDRRCIGLDW*
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