prot_P-littoralis_Contig165.32.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig165.32.1
Unique Nameprot_P-littoralis_Contig165.32.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length699
Homology
BLAST of mRNA_P-littoralis_Contig165.32.1 vs. uniprot
Match: D7G5B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B7_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 6.520e-137
Identity = 228/402 (56.72%), Postives = 275/402 (68.41%), Query Frame = 0
Query:  309 DGQEQGHGRDWAKRWALTCSAVV-LAPVVLVCILMGVLLAWPHMKLAAGSALSGLRGLAVNSP--EKCFLLPSERGTAACKEGAEITDCPSQGVCGAGRLLTCNLPFTTTEDSSDCILTAEVEEEAQAVVEALRTLTIEQLCKGNGLIMPSPKASVTTSFITLTDAAIAQKRGPLSFLAGMQPGNVAGLIELDGKAATEFGGGEGGSE--------RTARLSKIMYDEVMLTPGWRCKARLAAGSWVLAYWPYCLAVYVLVLVVGCLDFRRWKSYRTRVQVCTIRDKCYQVLLHHATTDDA-LQVSHIQSSLGDRRGARGEGSLTTIPQEDVIELWPLVEKEVEKDTRIRRNFMNMRGQRNVACWKWVGPAGTKFESIGDLPPGPAPRLWLLRWLNQPRPTP 698
            DG +    R  +  W   C+ VV LAPVV++ ++ G+L+AWPH+++AAG A    RGL   +P  EKCFL P E+    CK G E  DCP    CGAGR+L CNLP+T  +D + C+L AE E+EA+AVVEALRTLT E+LCKG GLIMP  +AS   SFITLTDAA AQ RGPLS LAGM PGNV GLIEL+G+ A  FGGG+ G+E        R ARLS+  +D VM T GWRCKARLAAGSW + YW YCLA+Y LV+   CLD RR  SY   VQVCTIRD CYQ LL HA+ D + +QVSHIQSS+ D    R   +  TI Q  +  LWPLVE+EVE D RIRR + ++ G+R+VACWKWVGP GT+FE+IG L PG APRL LL    + RP P
Sbjct:  285 DGDDARPRRGKSLEWTFKCAVVVVLAPVVVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPSVEKCFLQPGEQEDIVCKSGTEAMDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEKEAKAVVEALRTLTAEELCKGKGLIMP--RASARGSFITLTDAATAQSRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEGCAGSGMERVARLSESAHDAVMRTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDLCYQTLLDHASKDSSPMQVSHIQSSVTDWTRQRVAKNRATI-QRHIAGLWPLVEREVEHDERIRRCYKSLAGKRSVACWKWVGPTGTRFETIGALNPGRAPRLLLLWCQERARPMP 683          
BLAST of mRNA_P-littoralis_Contig165.32.1 vs. uniprot
Match: A0A6H5L750_9PHAE (MSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L750_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 1.840e-133
Identity = 223/387 (57.62%), Postives = 268/387 (69.25%), Query Frame = 0
Query:  323 WALTCSAVVLAPVVLVCILMGVLLAWPHMKLAAGSALSGLRGLAVNSP--EKCFLLPSERGTAACKEGAEITDCPSQGVCGAGRLLTCNLPFTTTEDSSDCILTAEVEEEAQAVVEALRTLTIEQLCKGNGLIMPSPKASVTTSFITLTDAAIAQKRGPLSFLAGMQPGNVAGLIELDGKAATEFGGGEGGSE--------RTARLSKIMYDEVMLTPGWRCKARLAAGSWVLAYWPYCLAVYVLVLVVGCLDFRRWKSYRTRVQVCTIRDKCYQVLLHHATTDD-ALQVSHIQSSLGDRRGARGEGSLTTIPQEDVIELWPLVEKEVEKDTRIRRNFMNMRGQRNVACWKWVGPAGTKFESIGDLPPGPAPRLWLLRWLNQPRPTP 698
            WA  C+ V++  ++LV    G+L+AWP +++AAG A    RGL   +P  EKCFL   E+G   CK G E TDCP+   CGAGR+L CNLP+T  +D + C+L AE EEEA+AVVEALRTLT E+LCKG GLIMP  +AS   SFITLTDAA AQ RGPLS LAGM PGNV GLIEL+G+ A  FGGG+ G+E        R ARLS+  +D VM T GWRCKARLAAGSW + YW YCLA+Y LV+   CLD RR  SY   VQVCTIRD CYQ LL +A+ D  A+QVSHIQSS+ D    R   +  TI +  + +LWPLVE+EVE D RIRR + ++ G+RNVACWKWVGP GT FE+IG L PG APRL  LR   + RP P
Sbjct:  339 WAFKCAVVMVMVLLLVS---GLLVAWPQVQVAAGGAWGAFRGLTAKTPPVEKCFLQLGEQGDVVCKSGTEATDCPAHATCGAGRILHCNLPYTLKKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIMP--RASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEDCAGSGMERVARLSESAHDAVMDTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDVCYQTLLDNASKDSSAMQVSHIQSSVTDWTRQRVAKNRATIHRH-IADLWPLVEREVEHDERIRRCYKSLAGKRNVACWKWVGPTGTSFETIGALNPGRAPRLLFLRCQERERPMP 719          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5B7_ECTSI6.520e-13756.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L750_9PHAE1.840e-13357.62MSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig165contigP-littoralis_Contig165:103312..114806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig165.32.1mRNA_P-littoralis_Contig165.32.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig165 103296..116368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig165.32.1 ID=prot_P-littoralis_Contig165.32.1|Name=mRNA_P-littoralis_Contig165.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=699bp
MTRTMPTAKPRDEASTSPAEKRRRLAAGRAKARESSVNKSSLKRKSSGAE
GPTPPTKPRKQANPATATKEEARRASRKLAEMSAKRRKLAGESATRSIPN
GAGARDGGSSDEGSEEEDGMDTSGVDTPPTLVEPSPNRAAQPSPAAVTLS
SRSRLGVSDQTQPAPPMPETRAPGRWLSATSTSRPAVGGGGSPPSPFPPQ
GARGARQVSGRGENQEAGASRRGSSFLQHANTESKNTNGSMPAASNGSQA
EDEGSDASAGASWPRRSRRRETFVDSVRRETVQQEDCKDMSPVSPKGSSS
EGSDGDDDDGQEQGHGRDWAKRWALTCSAVVLAPVVLVCILMGVLLAWPH
MKLAAGSALSGLRGLAVNSPEKCFLLPSERGTAACKEGAEITDCPSQGVC
GAGRLLTCNLPFTTTEDSSDCILTAEVEEEAQAVVEALRTLTIEQLCKGN
GLIMPSPKASVTTSFITLTDAAIAQKRGPLSFLAGMQPGNVAGLIELDGK
AATEFGGGEGGSERTARLSKIMYDEVMLTPGWRCKARLAAGSWVLAYWPY
CLAVYVLVLVVGCLDFRRWKSYRTRVQVCTIRDKCYQVLLHHATTDDALQ
VSHIQSSLGDRRGARGEGSLTTIPQEDVIELWPLVEKEVEKDTRIRRNFM
NMRGQRNVACWKWVGPAGTKFESIGDLPPGPAPRLWLLRWLNQPRPTP*
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