prot_P-littoralis_Contig165.24.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: D7G5C0_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C0_ECTSI) HSP 1 Score: 197 bits (500), Expect = 2.120e-63 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
Query: 1 MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKKXXXXXXXXXXXXFKKPKKPKA 113
MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKKXXXXXXXXXXXXFKK KKPKA
Sbjct: 1 MAAVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKKXXXXXXXXXXXXFKKSKKPKA 113
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A835ZED0_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED0_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.720e-46 Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKM 90
AVGVPIKLLHEGEGH +T+EMKNGEIYRG L EAEDTMN F+T VTMT RDGRVSKLEQVYLRGSHIK ++LPD+LKNAPVFK VQKM
Sbjct: 6 AVGVPIKLLHEGEGHVITIEMKNGEIYRGRLMEAEDTMNSFITEVTMTARDGRVSKLEQVYLRGSHIKFIILPDLLKNAPVFKGVQKM 93
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A7S2S181_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S181_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.530e-41 Identity = 63/89 (70.79%), Postives = 78/89 (87.64%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKK 92
+GVPI++LHEGEGH ++VE++NGEIYRG L EAEDTMNCF+ VTMT RDGRVSKLEQVY+RGS +KL++LP+VLK++P F VQ MKK
Sbjct: 6 IGVPIRILHEGEGHTISVELRNGEIYRGTLKEAEDTMNCFLENVTMTARDGRVSKLEQVYIRGSQVKLIILPEVLKHSPAFNKVQTMKK 94
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A6S9H3G1_HETAK (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H3G1_HETAK) HSP 1 Score: 137 bits (344), Expect = 1.220e-39 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQ 88
+GVP+KLLHE EGH VT E+KNGEIYRG L+EAEDTMNC M+ VT T R+G+VSKLE VY+RGSH+KL++LPD+L+NAPVFK VQ
Sbjct: 6 IGVPVKLLHEAEGHVVTAELKNGEIYRGMLDEAEDTMNCAMSNVTFTARNGKVSKLESVYIRGSHVKLLILPDMLRNAPVFKKVQ 90
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: K3WSP0_GLOUD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSP0_GLOUD) HSP 1 Score: 135 bits (341), Expect = 3.710e-39 Identity = 61/89 (68.54%), Postives = 77/89 (86.52%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKK 92
VGVPI LLHEGEG VT+E+KNGEIYRGHL E+ED+MNC ++ V +T RDG+ +KLEQVY+RGSHIKL++LPD+LKN+P+F VQ +KK
Sbjct: 5 VGVPIALLHEGEGRNVTIELKNGEIYRGHLEESEDSMNCQLSNVVLTQRDGQKAKLEQVYVRGSHIKLIILPDILKNSPLFSKVQALKK 93
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: F0Y2Z6_AURAN (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Z6_AURAN) HSP 1 Score: 133 bits (334), Expect = 4.180e-38 Identity = 63/95 (66.32%), Postives = 81/95 (85.26%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIK-----LVVLPDVLKNAPVFKPVQKMKK 92
AVGVPIKLLHEGEGH VT+E+KNGEIYRGHL+E+E+TMNC +T V +T RDGRV+KLE VY+RGS IK ++LPD+LK++PVF+ V+++KK
Sbjct: 7 AVGVPIKLLHEGEGHMVTIELKNGEIYRGHLDESEETMNCLVTDVVVTARDGRVTKLENVYIRGSQIKRERRAFMILPDLLKHSPVFEKVKELKK 101
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A1V9ZC26_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC26_9STRA) HSP 1 Score: 132 bits (333), Expect = 5.930e-38 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKKXXXXXXXXXXXXFKKPKKPKA 113
++GVP+ LLHEGEGH +T+E+KNGEIY+GHL EAED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK VQ +KK KKPKK K
Sbjct: 4 SLGVPLSLLHEGEGHTITLELKNGEIYKGHLLEAEDSMNCQLKDVTLTGRDGQLSRLEQVYIRGSQVKLFILPDMLQKSPLFKKVQALKKPND----------KKPKKAKG 104
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A485LB96_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB96_9STRA) HSP 1 Score: 132 bits (333), Expect = 6.900e-38 Identity = 58/89 (65.17%), Postives = 78/89 (87.64%), Query Frame = 0
Query: 4 VGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKK 92
VGVP+ LLHEGEGH +T+E+KNGE+YRGHL E+ED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK VQ +KK
Sbjct: 5 VGVPLSLLHEGEGHQITLELKNGEVYRGHLVESEDSMNCQLKQVTLTGRDGQISRLEQVYVRGSQVKLFILPDMLQKSPLFKKVQALKK 93
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: A0A5D6XZW3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZW3_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.030e-38 Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKK 92
+VGVPI LLHEGEG VTVE+KNGEIYRGHL E+ED+MNC M V +T RDG+ KLEQVY+RGSHIKLV+LPDVLKN+P+ VQ +KK
Sbjct: 5 SVGVPIALLHEGEGRSVTVELKNGEIYRGHLLESEDSMNCQMRDVVLTQRDGQKRKLEQVYVRGSHIKLVILPDVLKNSPLLAKVQALKK 94
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Match: T0QL39_SAPDV (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QL39_SAPDV) HSP 1 Score: 132 bits (332), Expect = 8.420e-38 Identity = 57/90 (63.33%), Postives = 79/90 (87.78%), Query Frame = 0
Query: 3 AVGVPIKLLHEGEGHGVTVEMKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKK 92
++GVP+ LLHEGEGH +T+E+KNGEIY+GHL EAED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK +Q +KK
Sbjct: 4 SLGVPLSLLHEGEGHTITLELKNGEIYKGHLMEAEDSMNCQLKDVTLTGRDGQLSRLEQVYIRGSQVKLFILPDMLQKSPLFKKIQALKK 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig165.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig165.24.2 ID=prot_P-littoralis_Contig165.24.2|Name=mRNA_P-littoralis_Contig165.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bpback to top |