prot_P-littoralis_Contig1560.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1560.3.1
Unique Nameprot_P-littoralis_Contig1560.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length219
Homology
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A382L8W3_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382L8W3_9ZZZZ)

HSP 1 Score: 362 bits (928), Expect = 2.850e-125
Identity = 184/218 (84.40%), Postives = 198/218 (90.83%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGE-ELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKARAKAQGGD 217
            M IGIVGIKRGMTRIFTEEG SVPVTVIEATPNRITQVKSV+SDGYSA+QVT G++KASRVNKP AGHFAKANVEAGRKLWEF    E ELN+GD+LTVEAFE GQKVDV GQSKGKGFAGVVKRHNFK QD+THGNS+SHRAPGSIGQCQTPGRVFKGKKM+GHMGA +VTTQTLE+VRVD ENNLLLVKGAVPGA G D+IVTP+VKA   A GG+
Sbjct:    1 MAIGIVGIKRGMTRIFTEEGTSVPVTVIEATPNRITQVKSVESDGYSAIQVTKGSIKASRVNKPNAGHFAKANVEAGRKLWEFGPGDEKELNVGDSLTVEAFEVGQKVDVRGQSKGKGFAGVVKRHNFKMQDATHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGARKVTTQTLEVVRVDSENNLLLVKGAVPGANGGDVIVTPAVKA---ASGGE 215          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A7C7SIA5_9GAMM (50S ribosomal protein L3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7SIA5_9GAMM)

HSP 1 Score: 357 bits (916), Expect = 1.850e-123
Identity = 174/218 (79.82%), Postives = 199/218 (91.28%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGEELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKARAKAQGGDS 218
            MTIGIVGIKRGMTR+FTE+G S+PVTVIEATPNRITQVKSVD+DGY+A+QVT G VKASRV KP AG FAKA+VEAGR LWEFRT+  EL++GD+LTVEAF  GQKVDVCG+SKGKGFAGV+KR+NF+ QD+THGNSVSHRAPGSIGQCQTPGRVFKGKKM+GHMGAARVTTQTLE++++DQENNLLL+KGAVPGA G D+IVTP+VK    A GG+S
Sbjct:    1 MTIGIVGIKRGMTRVFTEDGVSIPVTVIEATPNRITQVKSVDTDGYTAIQVTAGTVKASRVKKPAAGQFAKASVEAGRSLWEFRTDDAELSVGDSLTVEAFTEGQKVDVCGKSKGKGFAGVIKRYNFQMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQTLEVIKIDQENNLLLIKGAVPGAKGGDVIVTPAVKV---ASGGES 215          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A3D0ZY18_9GAMM (50S ribosomal protein L3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ZY18_9GAMM)

HSP 1 Score: 352 bits (904), Expect = 1.290e-121
Identity = 174/210 (82.86%), Postives = 191/210 (90.95%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGE-ELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKA 209
            M IGIVGIKRGMTR+FTEEG S+PVTVIEATPNRITQVK+   DGYSA+QVT G +K+SRVNKP AGHFAKANVEAGRKLWEFR  GE ELN+GD+LTVE FEAG++VDV GQSKGKGFAGV+KRHNFK QD+THGNS+SHRAPGSIGQCQTPGRVFKGKKM+GHMGA +VT QTLEIVRVD ENNLLLVKGAVPGA G D+IVTP+VKA
Sbjct:    1 MAIGIVGIKRGMTRVFTEEGESLPVTVIEATPNRITQVKTAGIDGYSAIQVTKGGIKSSRVNKPRAGHFAKANVEAGRKLWEFRIGGETELNVGDSLTVEGFEAGERVDVSGQSKGKGFAGVIKRHNFKMQDATHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGARQVTIQTLEIVRVDNENNLLLVKGAVPGAKGGDVIVTPAVKA 210          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: UPI001AEFBDBF (50S ribosomal protein L3 n=1 Tax=Motiliproteus sediminis TaxID=1468178 RepID=UPI001AEFBDBF)

HSP 1 Score: 337 bits (863), Expect = 1.970e-115
Identity = 167/211 (79.15%), Postives = 189/211 (89.57%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEG-EELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKAR 210
            M IG+VG K GMTR+FTE+GASVPVTVIE  PNRITQVKS+++DGYSAVQVT+GA K+SRVNKP+AGHFAKA VEAGR LWEFR  G EE+ +GDALTVE FEAGQKVDV GQSKGKGF GV+KR NF+TQD+THGNS+SHRAPGSIGQCQTPGRV+KGKKMSGHMG  RVT QTLE+VRVD E NLLL+KGAVPGATG+D++V P+VKAR
Sbjct:    1 MAIGLVGRKAGMTRVFTEDGASVPVTVIEVEPNRITQVKSLENDGYSAVQVTVGAKKSSRVNKPQAGHFAKAGVEAGRGLWEFRLAGDEEVQVGDALTVERFEAGQKVDVTGQSKGKGFQGVIKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMSGHMGDERVTVQTLEVVRVDVERNLLLIKGAVPGATGSDVVVKPAVKAR 211          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A2E8KBI5_9GAMM (50S ribosomal protein L3 n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8KBI5_9GAMM)

HSP 1 Score: 332 bits (852), Expect = 9.330e-114
Identity = 163/209 (77.99%), Postives = 188/209 (89.95%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGEE-LNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVK 208
            MTIGIVGIKRGMTRIFTEEG S+PVTVIEATPNR+TQVK+++SDGY+A+Q+T G VK S V KP AGHF+KANVEAG+ L E R   EE +++GD+LTVEAFE GQKVDV GQSKGKGFAGVVKR+NFK QD+THGNS+SHRAPGSIGQCQTPGRV+KGKKM+GHMGAA+VT QTLEI++VDQEN+LLLVKGAVPGA G D+IV P+VK
Sbjct:    1 MTIGIVGIKRGMTRIFTEEGQSIPVTVIEATPNRVTQVKTLESDGYNAIQITHGTVKVSNVTKPVAGHFSKANVEAGQNLTELRCSAEEEISVGDSLTVEAFEEGQKVDVSGQSKGKGFAGVVKRYNFKMQDATHGNSISHRAPGSIGQCQTPGRVYKGKKMAGHMGAAKVTAQTLEIIKVDQENHLLLVKGAVPGAKGGDVIVKPAVK 209          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A2E4UW17_9GAMM (50S ribosomal protein L3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4UW17_9GAMM)

HSP 1 Score: 332 bits (850), Expect = 2.240e-113
Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTE-GEELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKARA 211
            MTIGIVGIKRGM+RIFT+EG S+PVTVIEATPNRITQ K+ D+DGY A+QVT G VK S+VNKP AGHF+K NV+AGR LWEFR E G +L IGDAL V AFE GQKVDV GQSKG+GFAGVV+RHNF TQD +HGNS+SHRAPGSIGQCQTPGRVFKGKKM+GHMGAA+VT QTLEI  VD E NLLL+KGAVPGA G D++V P+VKA+A
Sbjct:    1 MTIGIVGIKRGMSRIFTDEGVSIPVTVIEATPNRITQRKTADTDGYEAIQVTAGEVKQSKVNKPLAGHFSKGNVDAGRHLWEFRVEAGSDLTIGDALDVSAFEVGQKVDVTGQSKGRGFAGVVRRHNFSTQDMSHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTVQTLEIAEVDTERNLLLIKGAVPGARGGDLVVRPAVKAKA 212          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A2E7XGP0_9GAMM (50S ribosomal protein L3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XGP0_9GAMM)

HSP 1 Score: 330 bits (846), Expect = 7.650e-113
Identity = 167/209 (79.90%), Postives = 182/209 (87.08%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFR-TEGEELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVK 208
            MTIGIVG+KRGMTRIFTE+GAS+PVTVIEA+PNRI Q K+ D DGY A+QVT G VKASRVNKP AGHF+KANVEAGR L+EFR T   EL +GD LTVE FE GQK DV GQSKGKGFAGVVKR N + QD+THGNS+SHRAPG IGQCQTPGRVFKGKKM+GHMGA RVTTQTLE+VRVDQENNLLLVKGAVPGA G D+IV PSVK
Sbjct:    1 MTIGIVGVKRGMTRIFTEDGASMPVTVIEASPNRIAQRKTXDIDGYDALQVTCGEVKASRVNKPMAGHFSKANVEAGRSLYEFRCTADSELAVGDVLTVEGFEEGQKXDVTGQSKGKGFAGVVKRXNXQMQDATHGNSISHRAPGXIGQCQTPGRVFKGKKMAGHMGAVRVTTQTLEVVRVDQENNLLLVKGAVPGAAGXDVIVKPSVK 209          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A2E8VRN8_9GAMM (50S ribosomal protein L3 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8VRN8_9GAMM)

HSP 1 Score: 329 bits (844), Expect = 1.490e-112
Identity = 160/211 (75.83%), Postives = 184/211 (87.20%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEG-EELNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKAR 210
            MT+GIVGIKRGM+RIFTEEG S+PVTV+EATPNRITQ K+ DSDGY A+QVT G VK S+VNKP+AGHF+K NV AGR LWEFR +   EL +GDAL V AFE GQKVDV GQSKG+GFAGVVKRHNF+TQD +HGNS+SHRAPGSIGQCQTPGRVFKGKKM+GHMGAA+VT QTLEI +VD E NLLL+KGAVPGA G D+++ P+VKA+
Sbjct:    1 MTVGIVGIKRGMSRIFTEEGESIPVTVVEATPNRITQRKTADSDGYEAIQVTAGDVKQSKVNKPQAGHFSKNNVAAGRDLWEFRIDSASELAVGDALEVSAFEVGQKVDVTGQSKGRGFAGVVKRHNFRTQDMSHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTVQTLEIAQVDTERNLLLIKGAVPGARGGDLVIRPAVKAK 211          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A3P3VHI2_9GAMM (50S ribosomal protein L3 n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A3P3VHI2_9GAMM)

HSP 1 Score: 328 bits (842), Expect = 3.110e-112
Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGEE-LNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKARA 211
            MTIG+VG K GMTRIFTE+G S+PVTV+E  PNRITQVKSV++DGY+AVQVT G+ +A+RV KP AGHFAKAN EAGR LWEFR EGEE   +GD L V+ FEAGQKVDV GQSKGKGFAG +KR NF  QD+THGNS+SHRAPGSIGQCQTPGRVFKGKKMSGHMGA RVT Q+LE+VRVD E NLLL+KGAVPGATGAD++V P+VKARA
Sbjct:    1 MTIGLVGKKCGMTRIFTEDGVSIPVTVVEVDPNRITQVKSVETDGYAAVQVTTGSRRATRVTKPMAGHFAKANTEAGRGLWEFRVEGEESFQVGDQLGVDRFEAGQKVDVTGQSKGKGFAGAIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNLLLIKGAVPGATGADVVVQPAVKARA 212          
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Match: A0A081G119_9GAMM (50S ribosomal protein L3 n=7 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A081G119_9GAMM)

HSP 1 Score: 327 bits (837), Expect = 1.800e-111
Identity = 161/212 (75.94%), Postives = 184/212 (86.79%), Query Frame = 0
Query:    1 MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQVTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGEE-LNIGDALTVEAFEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQTPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGADIIVTPSVKARA 211
            M++G++G K GMTRIFT+EG SVPVTVIE  PNR+T VK+V++DGY+AVQVT G  KA+R++KPEAGHFAKA VEAGR LWEFR  G+E +N+GDALTVE FEAGQKVDV GQSKGKGF G VKR NF+TQD THGNS+SHRAPGSIGQCQTPGRVFKGKKM+GHMGA R T QTLEIVR+D E NLL+VKGAVPGA G D+IV P+VKARA
Sbjct:    1 MSVGLIGRKAGMTRIFTDEGVSVPVTVIEVEPNRVTSVKTVETDGYAAVQVTTGGKKANRLSKPEAGHFAKAGVEAGRGLWEFRVNGDEGINVGDALTVERFEAGQKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTVQTLEIVRIDAERNLLIVKGAVPGAMGGDVIVKPAVKARA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1560.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A382L8W3_9ZZZZ2.850e-12584.40Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A7C7SIA5_9GAMM1.850e-12379.8250S ribosomal protein L3 n=1 Tax=Gammaproteobacter... [more]
A0A3D0ZY18_9GAMM1.290e-12182.8650S ribosomal protein L3 n=1 Tax=Gammaproteobacter... [more]
UPI001AEFBDBF1.970e-11579.1550S ribosomal protein L3 n=1 Tax=Motiliproteus sed... [more]
A0A2E8KBI5_9GAMM9.330e-11477.9950S ribosomal protein L3 n=2 Tax=Gammaproteobacter... [more]
A0A2E4UW17_9GAMM2.240e-11376.8950S ribosomal protein L3 n=1 Tax=Gammaproteobacter... [more]
A0A2E7XGP0_9GAMM7.650e-11379.9050S ribosomal protein L3 n=1 Tax=Gammaproteobacter... [more]
A0A2E8VRN8_9GAMM1.490e-11275.8350S ribosomal protein L3 n=1 Tax=Gammaproteobacter... [more]
A0A3P3VHI2_9GAMM3.110e-11276.8950S ribosomal protein L3 n=2 Tax=Oceanospirillales... [more]
A0A081G119_9GAMM1.800e-11175.9450S ribosomal protein L3 n=7 Tax=Oceanospirillacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10Translation factorscoord: 129..210
e-value: 8.0E-25
score: 89.2
NoneNo IPR availableGENE3D3.30.160.810coord: 34..95
e-value: 1.4E-20
score: 75.5
NoneNo IPR availablePANTHERPTHR11229:SF1650S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTICcoord: 2..212
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 94..184
e-value: 2.5E-14
score: 53.1
IPR019927Ribosomal protein L3, bacterial/organelle-typeTIGRFAMTIGR03625TIGR03625coord: 4..203
e-value: 4.0E-90
score: 299.0
IPR019927Ribosomal protein L3, bacterial/organelle-typePANTHERPTHR1122950S RIBOSOMAL PROTEIN L3coord: 2..212
IPR019927Ribosomal protein L3, bacterial/organelle-typeHAMAPMF_01325_BRibosomal_L3_Bcoord: 2..207
score: 39.547432
IPR019926Ribosomal protein L3, conserved sitePROSITEPS00474RIBOSOMAL_L3coord: 101..124
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 1..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1560contigP-littoralis_Contig1560:3381..4037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1560.3.1mRNA_P-littoralis_Contig1560.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1560 3378..4037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1560.3.1 ID=prot_P-littoralis_Contig1560.3.1|Name=mRNA_P-littoralis_Contig1560.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MTIGIVGIKRGMTRIFTEEGASVPVTVIEATPNRITQVKSVDSDGYSAVQ
VTMGAVKASRVNKPEAGHFAKANVEAGRKLWEFRTEGEELNIGDALTVEA
FEAGQKVDVCGQSKGKGFAGVVKRHNFKTQDSTHGNSVSHRAPGSIGQCQ
TPGRVFKGKKMSGHMGAARVTTQTLEIVRVDQENNLLLVKGAVPGATGAD
IIVTPSVKARAKAQGGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000597Ribosomal_L3
IPR019927Ribosomal_L3_bac/org-type
IPR019926Ribosomal_L3_CS
IPR009000Transl_B-barrel_sf