prot_P-littoralis_Contig155.60.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig155.60.2
Unique Nameprot_P-littoralis_Contig155.60.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length237
Homology
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BLAST of mRNA_P-littoralis_Contig155.60.2 vs. uniprot
Match: A0A6H5JBR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR4_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.460e-12
Identity = 70/185 (37.84%), Postives = 88/185 (47.57%), Query Frame = 0 
Query:    9 GACQSRRWARQGSVGAGRSRARSAAPVVLLVACMVAVLYGNPTYFSNTLRSHHSHGTPPGAGIPEGDGHQSVTSGRSTVEREMETRGGGAVRATETLVLSHASIMEP--LAEEEQLAEPLPPYRPAAGAAVVAFTARGENVEIVTSGGDKGGVQHPWNDNGARKVEDE---RRVRTLTVGGANVS 188
            G  QSRR  RQG +  GRSRARSA PVV+L  CMVAVLY N +Y+S++L +H S   P G   P     Q  +        E E  G     A +  + S AS  +   L EE QL EP PP   AAGA   A         ++   GD       W+D+G            V +LTVGG +V+
Sbjct:    6 GVAQSRRRNRQGPLEGGRSRARSAVPVVVLGTCMVAVLYWNVSYYSDSLHNHRSSAGPTGGSAPVAQNIQVQSEPLRDTPAEGEG-GDDPGDAADVPLTSKASSSKKALLPEEGQLPEP-PPATSAAGATEGA---------VINGEGD-------WSDDGEAGEGGSGAGEGVHSLTVGGGSVA 172
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.60.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBR4_9PHAE7.460e-1237.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig155contigP-littoralis_Contig155:286412..306667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig155.60.2mRNA_P-littoralis_Contig155.60.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig155 286412..306693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig155.60.2 ID=prot_P-littoralis_Contig155.60.2|Name=mRNA_P-littoralis_Contig155.60.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
MDGMGCTQGACQSRRWARQGSVGAGRSRARSAAPVVLLVACMVAVLYGNP
TYFSNTLRSHHSHGTPPGAGIPEGDGHQSVTSGRSTVEREMETRGGGAVR
ATETLVLSHASIMEPLAEEEQLAEPLPPYRPAAGAAVVAFTARGENVEIV
TSGGDKGGVQHPWNDNGARKVEDERRVRTLTVGGANVSALDEGGRGEGRW
GDDEGAAATNIDHDGGGGLRGGELATAPAAARNELAT
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