prot_P-littoralis_Contig155.48.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig155.48.1
Unique Nameprot_P-littoralis_Contig155.48.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length132
Homology
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BLAST of mRNA_P-littoralis_Contig155.48.1 vs. uniprot
Match: A0A6H5JBR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR4_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 7.070e-6
Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 0 
Query:   47 GASDAGRFTARSAVPVVVLGACMTAVLYVNFTYLSNTLRSNHSHDTPPNAGTPVQDGHQSYTSGL 111
            G  + GR  ARSAVPVVVLG CM AVLY N +Y S++L ++ S   P     PV    Q  +  L
Sbjct:   17 GPLEGGRSRARSAVPVVVLGTCMVAVLYWNVSYYSDSLHNHRSSAGPTGGSAPVAQNIQVQSEPL 81
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBR4_9PHAE7.070e-646.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig155contigP-littoralis_Contig155:166095..196523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig155.48.1mRNA_P-littoralis_Contig155.48.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig155 166095..196524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig155.48.1 ID=prot_P-littoralis_Contig155.48.1|Name=mRNA_P-littoralis_Contig155.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=132bp
DKLTTTPPTHPTRGRQTESKAAEAHKRSSNRLITSAFGRWWSVHSWGASD
AGRFTARSAVPVVVLGACMTAVLYVNFTYLSNTLRSNHSHDTPPNAGTPV
QDGHQSYTSGLITAERGLEVRGRGAVRAAETL
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