prot_P-littoralis_Contig152.33.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.33.2
Unique Nameprot_P-littoralis_Contig152.33.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length849
Homology
BLAST of mRNA_P-littoralis_Contig152.33.2 vs. uniprot
Match: A0A6H5JZC9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC9_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 7.870e-120
Identity = 375/892 (42.04%), Postives = 464/892 (52.02%), Query Frame = 0
Query:   28 QHHRGWQARERSSAVAAAAGRGARPPLREAPGNGSE--AASPHRGNGGSSNTTKNLRPYDIPYA---------NSTAGSTTAASASEKVPGGSKDQGVTLRC-----------------------------------MYTSQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTDKLLGEIYLTVPQYEAFINQGEPELEMELFIVSLDGVIQSDGDPPPGVTSAADGAAAGVLSGGPAGAG--------RKRKLFKAFKPPARKAPSTALPPEDSSGLLP-GRIDQLRNGDRSGDHHNSSSGAIDGGREVLPAHTSYTGFGHVESLWDDXXXXXXXXXXXXXXXXAESVGFVSRGNAGWGMG--AGAGCRSAYDGSSGGGSSRAGMFPGAWSEGVHLQQQQHVQWSPTAVSAADNTSDWMWGQEDARPGETHNSSSSSDGRPPPRLSSRSARDGDGDLDFPLKEQERLRYED---PTHSGRDDPASYESFRNSDGGGETCPSSAGRSALRGGSQGVDGAEVGHRH--YYGGHQQIDGDGSFVQAGGAG-LEDRPFGR-NAVSEHGAGARVPE-VDR-LPGXXXXXXXXXXANIGGKLRSTQDILSLFGGFGGISSPAARDFTGHGWQAPREKEAAATPLESRGSNNIPPELGGTGNPHVPAVEGGISRAADMRRAQKASRAXXXXXXXXXXXXXXXXLTXXNEEAGAASATSDGAASADWVCGVCGVRRRASSTSCXXXXXXXQAPRSGDVVGEGGDGHPYGGVDNFRGDLGVIESSDKQPGWG-GHDFRGGEW-EDQGWDGVAA--GNDTARAGGVDGVDTVSLEGQGAVGRGRSSSPSRPASLSHTGDEGGSEGA-AGSTPGSSSKHRMIGVRMQMDMGSSSDSDDA 848
            QHHRGWQARER+++       GAR P RE+P +  +  AA+P +     ++++K+LRP+DIPYA         N+TAG TTA++   KVPGG  D+G+ LRC                                   MYT+QKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVT+KLLGE+YLTVPQYEAFI QGEPELEMEL+IVSLDGVIQSD +                                 +KRK+FKAFKPPAR+ P+ A  P+DS G LP G +    NGDR GD    S+    GG ++ P  T+YTGFGHVESLWD+                 +  G      AGWGMG  AG G ++ YD       + + +   A SE   +Q   H     T  SA  +T+ WMWG     P   H    S DG   P   SRS  D         ++QER R+++   P H G D P+SY                     LR G+   D  +VG R   +Y  +Q+   DG+   AGG G  E+  FGR NA+   GAG+RV E VDR  PG               ++RSTQDILSLFGGFGG  +P+ +    HG Q   E+E A +  + RG    P     +G+  +P V GGI RA DMRR QK +RA XXXXXXXXX             A A  A++D A + DW CG CGVR  +SS SC       Q  RS D V +GGD       D  RG +G  E    + GWG G DF GGE  + +  +G A   G+     G  +G++       GA GR R+SSP RPA    +G  GG EGA  GS   + S  R IG RMQMDMGSSSDSD+A
Sbjct:   21 QHHRGWQARERTASG------GARSPSRESPASNRDGSAANPRK-----ASSSKSLRPHDIPYATGNSYAAAVNTTAG-TTASAEPGKVPGGIDDKGIVLRCVDTGRPGYVCVETTANRVRFFLSDVALLPAVLPRCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELYIVSLDGVIQSDDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRKIFKAFKPPARREPTPAPQPDDSWGRLPPGGVSLRGNGDRGGDGRFPSNR---GGGKLSPR-TTYTGFGHVESLWDEDEEEDDGQDRHE-----DGAGLADEHRAGWGMGGAAGPGYQNPYD-----VGNESDVLQQARSEAA-VQPPYH---RSTGTSAVGSTNTWMWGP----PAGEH----SLDG---PLRPSRSTADFASGSPAQQQQQERGRHDETAVPGHHGEDGPSSY------------------LERLRRGNDDDD--DVGRRSASHYPENQRCGRDGAVTAAGGTGGREENTFGRGNAIG--GAGSRVSEEVDRETPGDGARM----------EMRSTQDILSLFGGFGG--TPSTQGGHDHGEQ---ERETAES--QWRGPTEAPLGSQASGDALMP-VGGGIRRAVDMRRTQKEARAAXXXXXXXXXVAGAV-----TGAASARGASNDDAVTGDWACGTCGVRGGSSSASCRVCGAKRQELRS-DGVAQGGD-------DGVRGGIGSQEG---RVGWGRGDDFGGGERPQKKALEGRAGDVGDRPVILGIAEGLEA------GAPGRWRTSSPDRPA-FPQSGAGGGGEGAFGGSVLETPSSCRKIGHRMQMDMGSSSDSDEA 808          
BLAST of mRNA_P-littoralis_Contig152.33.2 vs. uniprot
Match: D8LRG4_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG4_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.800e-44
Identity = 92/124 (74.19%), Postives = 101/124 (81.45%), Query Frame = 0
Query:   79 KNLRPYDIPYA---------NSTAGSTTAASASEKVPGGSKDQGVTLRCMYTSQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTDKLLGEIYLTVPQYEAFINQGEPELEMELFIVSLDG 193
            K+LRPYDIPYA         N+TAG+  +A A  KVPGG  D+G+ LRCMYT+QKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVT+KLLGE+YLTVPQYEAFI QGEPELEMEL     DG
Sbjct:   42 KSLRPYDIPYATGNSNAAAVNTTAGTAASAEAG-KVPGGIDDKGIVLRCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELLRRGDDG 164          
BLAST of mRNA_P-littoralis_Contig152.33.2 vs. uniprot
Match: A0A835YK32_9STRA (DUF2439 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK32_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.180e-23
Identity = 78/201 (38.81%), Postives = 109/201 (54.23%), Query Frame = 0
Query:  116 LRCMYTSQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTDKLLGEIYLTVPQYEAFINQGEPELEMELFIVSLDGVIQSDGDPPPGVTSAADGAAAGVLSGGPAGAGRKRKLFKAFKPPARKAPSTALPPEDSSGLLPGRIDQ------------LRNGDRSGDHHNSSSGAIDGGREVLPAHTSYTGFGHVESLWDD 304
            LRC++TSQ TKKRKTW DGAV+CC KR  V+LY+WS+ LGVT+K LGE +L   ++ AF+ Q EPELEME ++V+L+GV ++        T  ++G +     GG  GA +K KL K +K P +      +P   S   +  R+ Q               G   G    + + A  G      A ++  GFG + SLWDD
Sbjct:   11 LRCLFTSQLTKKRKTWQDGAVRCCAKRLSVTLYKWSDTLGVTEKTLGESFLNAAEFNAFVTQKEPELEMEKYLVTLEGVTEN--------TYTSNGDSQQSSEGG--GAAKKPKL-KGWKAPTK----VTVPARPSDDDVYERLRQQXXXXXXXXXXXXXXGYSGGMQQRAGAQAAVGNGRCAGAISN--GFGRLSSLWDD 194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.33.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZC9_9PHAE7.870e-12042.04RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LRG4_ECTSI1.800e-4474.19RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A835YK32_9STRA3.180e-2338.81DUF2439 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1060.10coord: 675..714
e-value: 3.2E-5
score: 25.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 791..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 742..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..621
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..502
IPR018838Domain of unknown function DUF2439PFAMPF10382DUF2439coord: 117..195
e-value: 7.6E-9
score: 35.8
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 676..709
score: 8.648336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:135199..138615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.33.2mRNA_P-littoralis_Contig152.33.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 134901..139034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.33.2 ID=prot_P-littoralis_Contig152.33.2|Name=mRNA_P-littoralis_Contig152.33.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=849bp
MVRPAGEAAPAAHDGQALDETREGSTGQHHRGWQARERSSAVAAAAGRGA
RPPLREAPGNGSEAASPHRGNGGSSNTTKNLRPYDIPYANSTAGSTTAAS
ASEKVPGGSKDQGVTLRCMYTSQKTKKRKTWSDGAVKCCPKRQRVSLYRW
SEALGVTDKLLGEIYLTVPQYEAFINQGEPELEMELFIVSLDGVIQSDGD
PPPGVTSAADGAAAGVLSGGPAGAGRKRKLFKAFKPPARKAPSTALPPED
SSGLLPGRIDQLRNGDRSGDHHNSSSGAIDGGREVLPAHTSYTGFGHVES
LWDDDDEEGEEEEQGRRGGGAESVGFVSRGNAGWGMGAGAGCRSAYDGSS
GGGSSRAGMFPGAWSEGVHLQQQQHVQWSPTAVSAADNTSDWMWGQEDAR
PGETHNSSSSSDGRPPPRLSSRSARDGDGDLDFPLKEQERLRYEDPTHSG
RDDPASYESFRNSDGGGETCPSSAGRSALRGGSQGVDGAEVGHRHYYGGH
QQIDGDGSFVQAGGAGLEDRPFGRNAVSEHGAGARVPEVDRLPGGGGGGG
DDDDANIGGKLRSTQDILSLFGGFGGISSPAARDFTGHGWQAPREKEAAA
TPLESRGSNNIPPELGGTGNPHVPAVEGGISRAADMRRAQKASRAAAASA
AAAAAAERAATLTAANEEAGAASATSDGAASADWVCGVCGVRRRASSTSC
RVCGAKRQAPRSGDVVGEGGDGHPYGGVDNFRGDLGVIESSDKQPGWGGH
DFRGGEWEDQGWDGVAAGNDTARAGGVDGVDTVSLEGQGAVGRGRSSSPS
RPASLSHTGDEGGSEGAAGSTPGSSSKHRMIGVRMQMDMGSSSDSDDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018838DUF2439
IPR001876Znf_RanBP2