prot_P-littoralis_Contig152.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.10.1
Unique Nameprot_P-littoralis_Contig152.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length395
Homology
BLAST of mRNA_P-littoralis_Contig152.10.1 vs. uniprot
Match: D8LRH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH5_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 5.480e-46
Identity = 139/274 (50.73%), Postives = 164/274 (59.85%), Query Frame = 0
Query:   97 EKQLARKQEDFEKMREISAHMDNIVQRLATFFPPDGNKERRGGTHVPPPPAVPEITPLPLQPTGQGKDRTVTARVTTMDXXXXXXXXXXXXXXSVASGLHFDDDLSGSTVSSSRF-EDRQHEENR-RGGRGHGMTSREQS---------GIDADRGVGQRS-------ARERRVGTRNNHQAGKEANAEVLPENEKSANSIDKRLEAEWAPGMGRRRSRVSLGKPGANIATEASRERLLWDELRESVEGVAGSAEVPAPSMWGRVGPVGKNKEE 352
            E++LARK+EDFEKM+E+S HMDN+VQRLAT+FP DG  E    T V PP A PE+ PLPL      +DR V+ARV TM XXXXXXXXXXXXX SVASGLHFDD+LSGST S  R  ED QH E R  GGRG   TSR QS         G+D D   G R        A E R GT ++               ++SA+ +DK L  +     G  RSR   G+ GAN+  E S ERLLWDELRE++EGVAGS  VP    WG    V K + +
Sbjct:   86 ERRLARKREDFEKMKELSTHMDNVVQRLATYFPLDGT-EGEPKTDVVPPSAAPELPPLPLPSPDNARDRYVSARVLTMXXXXXXXXXXXXXXTSVASGLHFDDELSGSTASYGRHGEDEQHAERRGAGGRGQRGTSRRQSQSRADSDRRGMDTDEPAGSRKHEAEGPDAAEHRKGTTSS-----------WSRKDRSASVVDKGLGLKLESSGGEMRSRPPPGRAGANLGFEDSHERLLWDELRETLEGVAGSDAVPP--AWGHGAAVEKARAD 345          
BLAST of mRNA_P-littoralis_Contig152.10.1 vs. uniprot
Match: A0A6H5KZ75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ75_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 3.820e-43
Identity = 134/275 (48.73%), Postives = 159/275 (57.82%), Query Frame = 0
Query:  100 LARKQEDFEKMREISAHMDNIVQRLATFFPPDGNKERRGGTHVPPPPAVPEITPLPLQPTGQGKDRTVTARVTTMDXXXXXXXXXXXXXXSVASGLHFDDDLSGSTVSSSRFEDRQHEENRRG--GRGHGMTSREQS-------GIDADRGVGQRSARERRVGTRNNHQAGKEANAEVLPENEKSANSIDKRLEAEWAPGMGRRRSRVSLGKPGANIATEASR----------ERLLWDELRESVEGVAGSAEVPAPSMWGRVGPVGKNKEEVVR 355
            LARK+EDFEKM+E+SAHMDN+VQRLAT+FPPD + E    T V PP A PE+ PLPL P    + R V+ARV TMD  XXXXXXXXXXXXSVASGLHFDD+LS ST S+SR  + +    RRG  GRG   TSR QS       G+D D  VG R        T  +    ++         + SA+ + K L  +     G RRSR   G+ GAN+  E S           ERLLWDELRES+EGVAGS  VP    WG      K + E  R
Sbjct:   89 LARKREDFEKMKELSAHMDNVVQRLATYFPPD-DTEGEPNTDVVPPSAAPELPPLPLPPPDNARGRYVSARVLTMDRAXXXXXXXXXXXXSVASGLHFDDELSASTASNSRHGEDEQRAKRRGSGGRGQRGTSRRQSRADSNRRGMDTDEPVGSRKHEAEGPDTAEH----RKRTTSNWSRKDTSASVVGKGLGLKLESSGGGRRSRSPPGRAGANLGFEDSHXXXXXXXXXXERLLWDELRESLEGVAGSDAVPP--AWGHGAAAEKARAERAR 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRH5_ECTSI5.480e-4650.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ75_9PHAE3.820e-4348.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:35442..38570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.10.1mRNA_P-littoralis_Contig152.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 35324..38892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.10.1 ID=prot_P-littoralis_Contig152.10.1|Name=mRNA_P-littoralis_Contig152.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=395bp
MSGSQSSSFEDQSSGASSSDEVDEEESGSGSYSGSGSSSDGESGSGSESG
SSDGSDSGTGSGDDSGKSSSSGSGTYDSGDSQDEEEDGGQTEEEDKEKQL
ARKQEDFEKMREISAHMDNIVQRLATFFPPDGNKERRGGTHVPPPPAVPE
ITPLPLQPTGQGKDRTVTARVTTMDRAVSARRLMTDRAVSVASGLHFDDD
LSGSTVSSSRFEDRQHEENRRGGRGHGMTSREQSGIDADRGVGQRSARER
RVGTRNNHQAGKEANAEVLPENEKSANSIDKRLEAEWAPGMGRRRSRVSL
GKPGANIATEASRERLLWDELRESVEGVAGSAEVPAPSMWGRVGPVGKNK
EEVVREERRRRLIDEAIAVLLEGSSSGSSDDERLKDDDAYSKGA*
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