prot_P-littoralis_Contig15.85.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.85.1
Unique Nameprot_P-littoralis_Contig15.85.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length526
Homology
BLAST of mRNA_P-littoralis_Contig15.85.1 vs. uniprot
Match: D8LP78_ECTSI (EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI)

HSP 1 Score: 792 bits (2045), Expect = 1.300e-284
Identity = 381/527 (72.30%), Postives = 435/527 (82.54%), Query Frame = 0
Query:    1 MLKWLRGNDLINNGDMKTTHTLMTGGVVGVPDEMYDHFLALYANEVRSKNRTLSFSELKSDPVFCMYFDVDLLDTGVTSKEVSGTMISLIQRVIKTYYTGDTNDERFLCVACDTTAKKI-ERDGEPCVTKNGYHIILPNLRVNLSQALQIRYSVVYELEKTMGKRPETLNAWSDVIDRAPYANGLKMCGSFKCVKCTDCKKVDPGFKEDKRKLLSSMAKLRRKIHPREPGFDYTDLAEIHDDEFKDATFGDMYGKYLELTGFNSCRTCLNTGKTMEARTYMPALVLDGRGDPDASLIDIMSEDYFKAIKYTSIRCSEGRPETPGFVIPKGVPAAPTEENGANLRTFSSQKLSHLGSDMRAFTVNNDMYLSDAERMRLWKGPRVEDPTRLSTIETFIRERVCGAYSSVQIRKVCESQLSKKVARTQSRGSKMLGSIAGAHSGTMPAPPEVTVKQNRYLINVAGVGSTFCMNKGAEHTSNSVYFIITPSHCFQRCFSKKPDVRQGGTTCAEYRSGGFRVPANVSAILFP 526
            MLKWLR  D INN DM TT T+MTGGVV VPDE YD FL LYA EVRSKN+TLSFSEL+SDPVFCMYFDVD+L TGV     S  + S+IQ VI++YYTGD ND+RF CV CDT+ KK+   DGE  +TKNGYH I PNLR+NLSQALQ+RYSVVYELEKT+G R  +LN WSDVID+APY  GLKMCGSFK VKCTDCKK DP FK+ K+ LLS MAKLR+KI+PR+PGFDYTDL++IH DEFKDA FGD YGKYL+LTGFNSC+ CLNTGK ME RTYMP LVLDG GD D SL+D++ EDYF+ +KYTSIRC EG  ET GF IPKGVP APTEENGAN+RTFSS+ L+HLGSDM AFTVNND+YLSDA+ MRLWKGPRVED  RLS IETF+R  VC AYSSVQIRKV ES + KKVA+  + GSKM+ ++  AH+GT P  P+V +  NRYL+NVAGVGSTFCMNKG+EH SNSVYFIIT + CFQRCFSKKP++R+GGTTCAEYRS GF VP +VSA+LFP
Sbjct:    1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTGDQNDDRFRCVVCDTSVKKVPSADGETMLTKNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSEMAKLRKKIYPRQPGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQEGEKETSGFTIPKGVPRAPTEENGANMRTFSSKSLTHLGSDMHAFTVNNDIYLSDAQTMRLWKGPRVEDARRLSVIETFLRNNVCSAYSSVQIRKVSESTI-KKVAQKPNGGSKMMNALIRAHAGTTPPSPDVALS-NRYLVNVAGVGSTFCMNKGSEHASNSVYFIITATQCFQRCFSKKPEIRRGGTTCAEYRSYGFAVPPSVSAVLFP 525          
BLAST of mRNA_P-littoralis_Contig15.85.1 vs. uniprot
Match: A0A6H5KIA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE)

HSP 1 Score: 712 bits (1839), Expect = 2.120e-253
Identity = 351/528 (66.48%), Postives = 417/528 (78.98%), Query Frame = 0
Query:    1 MLKWLRGNDLINNGDMKTTHTLMTGGVVGVPDEMYDHFLALYANEVRSKNRTLSFSELKSDPVFCMYFDVDLLDTGVTSKEVSGTMISLIQRVIKTYYTGDTNDE-RFLCVACDTTAKKIERD-GEPCVTKNGYHIILPNLRVNLSQALQIRYSVVYELEKTMGKRPETLNAWSDVIDRAPYANGLKMCGSFKCVKCTDCKKVDPGFKEDKRKLLSSMAKLRRKIHPREPGFDYTDLAEIHDDEFKDATFGDMYGKYLELTGFNSCRTCLNTGKTMEARTYMPALVLDGRGDPDASLIDIMSEDYFKAIKYTSIRCSEGRPETPGFVIPKGVPAAPTEENGANLRTFSSQKLSHLGSDMRAFTVNNDMYLSDAERMRLWKGPRVEDPTRLSTIETFIRERVCGAYSSVQIRKVCESQLSKKVARTQSRGSKMLGSIAGAHSGTMPAPPEVTVKQNRYLINVAGVGSTFCMNKGAEHTSNSVYFIITPSHCFQRCFSKKPDVRQGGTTCAEYRSGGFRVPANVSAILFP 526
            +LKWLR ND INN + +TTHTLMTGGVVGVP E YD FL LYA EV SKN+T+SFSEL+S+P FCMYFD+DLLD+   S EV   + SLIQ V++++Y G + D  RF CV C T  K+++ + GE  +TK+GYHI LPNLRV + QALQIRY VVYELEKT+G R + LNAWSDVID+APY NGLKMCGSFK VKCTD KK DP FK+ K+ LLSS+A+LRRKI+PR+ GF+Y+DLA++ DDEFKDA FGDMYG+YLELTGFNSC+TCLNTGK +E RTYMP L LDG GD DASLID++ +D FK +KYTSIRC +G  ET GFVIP+GVP APTEENGAN+RTFSS+KL+HLGSD++AFTVNND+YLSDA+ M LWKGPRVED  RLS IE FIRE VC  YSSVQIRKVCES+L +KV    S GSK++ S+ GAHSG++P PP V+V  NRYL+N+AGVGST+CMNKGA+HTSNSV                    R GGTTCA+YRSGG  VP  VS++LFP
Sbjct:    2 LLKWLRDNDFINNSERRTTHTLMTGGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGEKSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRVKCTDYKKTDPTFKDKKKALLSSIARLRRKIYPRDRGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCKDGESETSGFVIPEGVPKAPTEENGANMRTFSSKKLTHLGSDVQAFTVNNDIYLSDAQTMHLWKGPRVEDERRLSVIEKFIRESVCEMYSSVQIRKVCESRLIQKVIPRASGGSKLINSLVGAHSGSIPPPPPVSVS-NRYLVNIAGVGSTYCMNKGADHTSNSV--------------------RGGGTTCADYRSGGVPVPLAVSSVLFP 508          
BLAST of mRNA_P-littoralis_Contig15.85.1 vs. uniprot
Match: Q6XM41_9PHYC (FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC)

HSP 1 Score: 323 bits (828), Expect = 2.580e-100
Identity = 196/549 (35.70%), Postives = 300/549 (54.64%), Query Frame = 0
Query:    3 KWLRGNDLINNGDMKTTHTLMTGGVVGVPDEMYDHFLALYANEVRSKNRTLSFSELKSDPVFCMYFDVDLLDTGVTSKEVSGTMISLIQRVIKTYYTGDTNDERFLCVACDTTAKKIERDGEPCVTKNGYHIILPNLRVNLSQALQIRYSVVYELEKTMGKRPETLNAWSDVIDRAPYANGLKMCGSFKCVKCTDCKKVDPGF--KEDKRKLLSSMAKLRRKIHPREPG--FDYTDLAEIHDDEFKDATFGDMYGKYLELTGFNSCRTCLNTGKTMEA-RTYMPALVLDGRGDPDASLIDIMSEDYFKAIKYTSIRCSEGRPETPGFVI-PKGVPA----APTEENGANLRTFSSQKLSHLGSDMRAFT-------VNNDMYLSDAERMRLWKGPRVEDPTRLSTIETFIRERVCGAYSSVQIRKVCESQLSKKVART------QSRGSKMLGSIAGAHSGTMPAPPEVTVKQNRYLI--NVAGVGSTFCMNKGAEHTSNSVYFIITPSHCFQRCFSKKPDVRQGGTTCAEYRSGGFRVPANVSAILFP 526
            ++LR +   +N  +  THT+M+GGV+ VP+E YD FL +YA E+ S NR L+FSELKS  VF MYFD+D+L+T          +   + R ++ YYT D  ++ F CV C T  KK  +D      KNG H+I P+LRVNL  ALQ+R+ +V  LE T G R   +N W D+ID+APY NGLKMCGS K + C +CK  +     + +  +++  +  +RRK +PR     FDY+++  I  DEFK  T  +++ +Y E TG+  C  C N G  +E  R YMPA+VL+G G      ++ + ++  +A+++TSIRC      T G+ + P  V      A  E  G ++R  +   L+ LG ++   +       VN  +  +DA+ +R WKG  + D   +  I+  +R  +   Y  +Q+R+V    + K V         + +  K+L  +AG          +  V+Q+  +I   V+G G+++CMNK  EH SN +YF ITP   +Q+CFS+K  +  G   C  YRSG +++   +   LFP
Sbjct:    9 QFLRAHGCFHNKTIPRTHTIMSGGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYT-DVEEDTFKCVVCTTKPKKRTQDE---YIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEVVEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCRPSDEVTGGYTMSPDNVGQYLRYARYEHRGESVRNNTVTCLNKLGPELADMSPGMYREAVNGAIAGNDADVIRTWKGEEITDTDVIEAIQNDVRV-IHSNYKQLQVRQVFHLGVGKTVKVNAFGEIARGKRKKVLLMMAGIAEKNKVDMADKQVEQDTMVIVARVSGPGASYCMNKNREHGSNHIYFWITPEGIYQKCFSRKDAL--GSLPCKAYRSGCYKISRALKLKLFP 550          
BLAST of mRNA_P-littoralis_Contig15.85.1 vs. uniprot
Match: B5LWL0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC)

HSP 1 Score: 317 bits (812), Expect = 3.020e-98
Identity = 189/510 (37.06%), Postives = 285/510 (55.88%), Query Frame = 0
Query:   19 THTLMTGGVVGVPDEMYDHFLALYANEVRSKNRTLSFSELKSDPVFCMYFDVDLLDTGVTSKEVSGTMISLIQRVIKTYYTGDTNDERFLCVACDTTAKKIERDGEPCVTKNGYHIILPNLRVNLSQALQIRYSVVYELEKTMGKRPETLNAWSDVIDRAPYANGLKMCGSFKCVKCTDC--KKVDPGFKEDKRKLLSSMAKLRRKIHPR--EPGFDYTDLAEIHDDEFKDATFGDMYGKYLELTGFNSCRTCLNTGKTMEARTYMPALVLDGRGDPDASLIDIMSEDYFKAIKYTSIRCSEGRPETPGFVIPKGVPAAPTEENGANLRTFSSQKLSHLGSDMRAFTVNNDMYLSDAERMRLWKGPRVEDPTRLSTIETFIRERVCGAYSSVQIRKVCESQLSKKVAR-------TQSR----GSKMLGSIAGAHS--GTMPAPPEVTVKQNRYLINVAGVGSTFCMNKGAEHTSNSVYFIITPSHCFQRCFSKKPDVRQGGTTCAEYRS 511
            THT+M+GGV+ V +E YD FL +YA E+   NRTL+FSELKS+ VF MYFD+D++D+   S +   ++   +   ++ +Y  D + + F CV C T  K +    +    KNG H+I P L V L  ALQ+R++ V +LE   G+R    N W DVID+APY NGLKMCGS K + C++C  KK +   K +   +L  +  +RRK +PR  +PGFDY+++  I  DEFK+    +++  Y + TG   C  C + G  +E R YMPA VL G G    + ++ ++++  + +++TSIR       T G+ +P+G  A  TE    +L+   +Q L      +    VN +++ SDA  ++ WKG  +  P  L+ I   IR      Y  + +R+  E +++K VA        T+S+    GSK L ++A A+   G      EV     R  + VAG GS +CMNKGAEHTSNS++F I+      +CFS+K  + Q G  C ++RS
Sbjct:   25 THTIMSGGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYI-DIDQDLFKCVVCTTKPKPLS---DKDTFKNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVRKKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIRSRPSDRMTAGYTVPEGYTAPRTERPTNSLQILGAQ-LKSFSPGIYREAVNAEIFGSDAAGIKTWKGCEITAPKTLNLIAHEIRN-YATVYQDLVVRQAFEMRVAKAVATSVVSSGSTRSKRGRAGSKALENMAVANKVPGRERRVLEVVA---RIFVRVAGTGSLYCMNKGAEHTSNSIFFWISQDGIAHKCFSRKDVLGQSGKRCKDFRS 525          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LP78_ECTSI1.300e-28472.30EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI[more]
A0A6H5KIA7_9PHAE2.120e-25366.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q6XM41_9PHYC2.580e-10035.70FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWL0_9PHYC3.020e-9837.06Uncharacterized protein n=1 Tax=Feldmannia species... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03121Herpes_UL52coord: 450..518
e-value: 3.4E-10
score: 39.7
IPR002755DNA primase, small subunitPFAMPF01896DNA_primase_Scoord: 68..343
e-value: 8.4E-22
score: 78.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:192923..194500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.85.1mRNA_P-littoralis_Contig15.85.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 192923..194500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.85.1 ID=prot_P-littoralis_Contig15.85.1|Name=mRNA_P-littoralis_Contig15.85.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=526bp
MLKWLRGNDLINNGDMKTTHTLMTGGVVGVPDEMYDHFLALYANEVRSKN
RTLSFSELKSDPVFCMYFDVDLLDTGVTSKEVSGTMISLIQRVIKTYYTG
DTNDERFLCVACDTTAKKIERDGEPCVTKNGYHIILPNLRVNLSQALQIR
YSVVYELEKTMGKRPETLNAWSDVIDRAPYANGLKMCGSFKCVKCTDCKK
VDPGFKEDKRKLLSSMAKLRRKIHPREPGFDYTDLAEIHDDEFKDATFGD
MYGKYLELTGFNSCRTCLNTGKTMEARTYMPALVLDGRGDPDASLIDIMS
EDYFKAIKYTSIRCSEGRPETPGFVIPKGVPAAPTEENGANLRTFSSQKL
SHLGSDMRAFTVNNDMYLSDAERMRLWKGPRVEDPTRLSTIETFIRERVC
GAYSSVQIRKVCESQLSKKVARTQSRGSKMLGSIAGAHSGTMPAPPEVTV
KQNRYLINVAGVGSTFCMNKGAEHTSNSVYFIITPSHCFQRCFSKKPDVR
QGGTTCAEYRSGGFRVPANVSAILFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002755DNA_primase_S