prot_P-littoralis_Contig15.37.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.37.1
Unique Nameprot_P-littoralis_Contig15.37.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length146
Homology
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BLAST of mRNA_P-littoralis_Contig15.37.1 vs. uniprot
Match: D8LPF0_ECTSI (EsV-1-124 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPF0_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 5.340e-35
Identity = 69/128 (53.91%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:   19 NISVGPYTFPSTEPVKGSVLVTDGTGNLSFSPAN--TRVEVSAAAHVVAASEDIVAITVAQDTALTLPDPATKVVGNILYVVKEAAGAHVVTIAPSGAELISGQTSHVLSSEYGAAKLYTNGTDWFIL 144
            NI +G + +PST P+ GSVL TDG GNL+F   N  T V+ +A A+ ++ S+DIVA+    DT LTLPDP++KVVG+++ VVKE  G + VT+ P G EL+SG +S VLS  YG+ K+YTNGTDWF L
Sbjct:   32 NIQIGLFNWPSTTPLPGSVLKTDGLGNLTFEVPNVHTSVDTAAPAYAISTSDDIVAVAGTLDTTLTLPDPSSKVVGDLIVVVKEGGGDNSVTVVPFGTELLSGGSSVVLSQAYGSLKIYTNGTDWFAL 159
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BLAST of mRNA_P-littoralis_Contig15.37.1 vs. uniprot
Match: Q8QNF5_ESV1K (EsV-1-124 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNF5_ESV1K)

HSP 1 Score: 124 bits (311), Expect = 1.190e-33
Identity = 66/128 (51.56%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:   19 NISVGPYTFPSTEPVKGSVLVTDGTGNLSFSPAN--TRVEVSAAAHVVAASEDIVAITVAQDTALTLPDPATKVVGNILYVVKEAAGAHVVTIAPSGAELISGQTSHVLSSEYGAAKLYTNGTDWFIL 144
            +I +G +T+PST P  GSVL TDG GNL+F   N  T V+ +++A+ ++ S+DIVA+  + DT LTLPDP+ KV G+++ +VKE  G + VT+ P G EL+SG +S VLS  YG+ K+YTNGTDWF L
Sbjct:   19 SIQIGLFTWPSTTPPAGSVLKTDGLGNLTFEVPNVHTAVDTASSAYAISTSDDIVAVAGSLDTTLTLPDPSAKVTGDMIVIVKEGGGENSVTVVPFGTELLSGGSSVVLSQPYGSFKIYTNGTDWFAL 146
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.37.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPF0_ECTSI5.340e-3553.91EsV-1-124 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNF5_ESV1K1.190e-3351.56EsV-1-124 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:115792..116229 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.37.1mRNA_P-littoralis_Contig15.37.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 115792..116232 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.37.1 ID=prot_P-littoralis_Contig15.37.1|Name=mRNA_P-littoralis_Contig15.37.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=146bp
MSGTVNIGSITVTSMSAGNISVGPYTFPSTEPVKGSVLVTDGTGNLSFSP
ANTRVEVSAAAHVVAASEDIVAITVAQDTALTLPDPATKVVGNILYVVKE
AAGAHVVTIAPSGAELISGQTSHVLSSEYGAAKLYTNGTDWFILT*
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