prot_P-littoralis_Contig15.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.29.1
Unique Nameprot_P-littoralis_Contig15.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length526
Homology
BLAST of mRNA_P-littoralis_Contig15.29.1 vs. uniprot
Match: Q8QNE4_ESV1K (EsV-1-135 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNE4_ESV1K)

HSP 1 Score: 315 bits (806), Expect = 1.650e-97
Identity = 175/286 (61.19%), Postives = 202/286 (70.63%), Query Frame = 0
Query:    1 MSSALVDAKSLCNDQILDALNYPMFAIFKIQHDQIADRVDSDNKLLYHFKQSMSKMGQWNKEIVHDFCAKLVKKFPGLKTCEMLVAEMITLTCKIMNEAHGSDERYKPVGFAFFDVLHAFIVECSTVFIEHPEWFSHGTDSTEYQTCVNNARIAMKNRGVVYNAVRKYVSLVDVAGVPNFSIPSASXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXSGDDGQDTGDDAAGAHGAVTKNIDVVTGDVYTAA---SCLQESMATHMSNGNLVHPG 283
            MSSALVDAK+LCNDQILD LN+PMF IF+IQHDQIA+RVDSDNKLLYHFKQSMSKM +WN  +VHDFC KLVKKFP +  CE L  EMI LT KIM+EAH SD RY PV FAF DVLH+FIVECS VFIEHPEWFSHG+DSTEYQTC+NNARIAMKNR VVYNA RKYV L +V   P+ S     XXXXXXXXXXXX                                   G ++G++    H  +TKNI+VVTGDV T A      QE+M+ H+S+G++++PG
Sbjct:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMSKMSEWNSSVVHDFCGKLVKKFPAISRCEALATEMIRLTSKIMDEAHDSDGRYVPVDFAFHDVLHSFIVECSKVFIEHPEWFSHGSDSTEYQTCLNNARIAMKNRDVVYNATRKYVMLTNVPASPSTSSXXXXXXXXXXXXXXXXARRSLIPESFAGAEPVSASGIYLTTENESESCAGGGDESGNEEVADHLEITKNINVVTGDVETVAVPSQTFQETMSNHLSSGHIMYPG 286          
BLAST of mRNA_P-littoralis_Contig15.29.1 vs. uniprot
Match: D8LPG1_ECTSI (EsV-1-135 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPG1_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.670e-93
Identity = 178/291 (61.17%), Postives = 205/291 (70.45%), Query Frame = 0
Query:    1 MSSALVDAKSLCNDQILDALNYPMFAIFKIQHDQIADRVDSDNKLLYHFKQSMSKMGQWNKEIVHDFCAKLVKKFPGLKTCEMLVAEMITLTCKIMNEAHGSDERYKPVGFAFFDVLHAFIVECSTVFIEHPEWFSHGTDSTEYQTCVNNARIAMKNRGVVYNAVRKYVSLVDVAGVPNFSIPSASXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXS-----GDDGQDTGDDAAGAHGAVTKNIDVVTGDVYTAAS---CLQESMATHMSNGNLVHPG 283
            MSSALVDAK+LCNDQILD LN+PMF IF+IQHDQIA+RVDSDNKLLYHFKQSM+KM +WN  +VHDFC KLVKKFP +  CE L  EMI LT KIM+EAH SD RY PV FAF DVLH+FIVECS VFIEHPEWFSHGTDSTEYQTC+NNARIAMKNR VVYNA RKYV L +             XXXXXX         XXXXXXXXX +                 S     G DG  +G++    H  +TKNI+VVTGDV T A+     QE+M+ H+S+G++++PG
Sbjct:    1 MSSALVDAKALCNDQILDVLNHPMFTIFQIQHDQIAERVDSDNKLLYHFKQSMAKMSEWNSSVVHDFCGKLVKKFPAINRCEALATEMIRLTSKIMDEAHDSDGRYVPVDFAFHDVLHSFIVECSKVFIEHPEWFSHGTDSTEYQTCLNNARIAMKNRDVVYNATRKYVMLTNAPASXXXXXXXXXXXXXXXPSPSYSSSSXXXXXXXXXFASADPASASGIYLTTENDSQSCAGGGDG--SGNEEVADHLEITKNINVVTGDVETVAAPSQTFQENMSNHLSSGHIMYPG 289          
BLAST of mRNA_P-littoralis_Contig15.29.1 vs. uniprot
Match: Q6XM66_9PHYC (FirrV-1-A21 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM66_9PHYC)

HSP 1 Score: 75.9 bits (185), Expect = 1.020e-12
Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    2 SSALVDAKSLCNDQILDALNYPMFAIFKIQHDQIADRVDSDNKLLYHFKQSMSKMGQWNKEIVHDFCAKLVKKFP--GLKTCEMLVAEMITLTCKIMNEAHGSDERYKPVGFAFFDVLHAFIVECSTVFIEHPEW 134
            SSAL++AK+L   ++ + L  P++ +F +Q+ QIA+R ++ N L+YH + SMS + QWN   + DF   LV +FP   L+  +  V  +  LTC I+N +  S      V       LHA +   S   ++H EW
Sbjct:    3 SSALIEAKTLSALKLYELLIDPLYDVFCMQYRQIANRTETTNSLVYHIRNSMSGIRQWNALTIRDFFNNLVVQFPQLDLEFTKQFV-HLQELTCNILNSSSASLVHTPSVSDRN-SFLHATLSGASNALLDHREW 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q8QNE4_ESV1K1.650e-9761.19EsV-1-135 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPG1_ECTSI1.670e-9361.17EsV-1-135 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q6XM66_9PHYC1.020e-1234.81FirrV-1-A21 n=1 Tax=Feldmannia irregularis virus a... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..525

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:105750..107570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.29.1mRNA_P-littoralis_Contig15.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 105750..107570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.29.1 ID=prot_P-littoralis_Contig15.29.1|Name=mRNA_P-littoralis_Contig15.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=526bp
MSSALVDAKSLCNDQILDALNYPMFAIFKIQHDQIADRVDSDNKLLYHFK
QSMSKMGQWNKEIVHDFCAKLVKKFPGLKTCEMLVAEMITLTCKIMNEAH
GSDERYKPVGFAFFDVLHAFIVECSTVFIEHPEWFSHGTDSTEYQTCVNN
ARIAMKNRGVVYNAVRKYVSLVDVAGVPNFSIPSASSSSASSASSASPPP
SPGTGGTGGTGSGSGSGSGSDSDADSESESGDDGQDTGDDAAGAHGAVTK
NIDVVTGDVYTAASCLQESMATHMSNGNLVHPGMSTGFGPAGVGFGFGFG
PPGPYPRGNVFAESLGRRGVGYDRVDIVKPDSSEVGSDVVDFILDAGGAD
FGSDSGSDSGSDSGSDSGSDSGSDSGSDSGSDFGSDSGSDFGSGSGSGSG
SGSDFGSGSDSGSGSGSGSDFGSGSDFDSDSGSGSGSDSDFDSELESDTD
FDYFESDGSESETCGSEEASSSDAGSAAEFESETDPETGSESGSESGSES
GSESGSESGSESGSGSERFASDGTE*
back to top