prot_P-littoralis_Contig148.51.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.51.3
Unique Nameprot_P-littoralis_Contig148.51.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.640e-126
Identity = 179/219 (81.74%), Postives = 203/219 (92.69%), Query Frame = 0
Query:    4 ISTQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            ++TQ+FLG+AATLIASS+AFVAPMAVRS AP +SS +LKMS GSDYVA+LPGAPF DGKIFDPL L+DGA+  D+K WREAE+KHGRVAMLA+LG+LVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFW FSLLGMAFIEYNTI TA+ +PSAVTGEGGLKEDY PGDLGFDPLN+KP+ + AL+VM+TKELNNGRLAMIG+AGMLVQEL+NPADILG
Sbjct:    2 VATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 2.800e-125
Identity = 179/218 (82.11%), Postives = 199/218 (91.28%), Query Frame = 0
Query:    5 STQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            S+ MFLGTAATLIASS+AFVAPMAVRS AP +S+ +LKMS GSDYVA+LPGAPF DGKIFDPL L+DGA   ++KLWREAE+KHGRVAMLA +G++VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KPK Q  LE MQTKELNNGRLAMIG+AGMLVQELVNPADILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 6.380e-118
Identity = 172/218 (78.90%), Postives = 196/218 (89.91%), Query Frame = 0
Query:    4 ISTQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 221
            +++QMFLGTAA LIASS+AFVAP+AVRS AP +++ +LKMS GSDYVA+LPGAPFSDGKIFDPL L+DGA   D+K WREAE+KHGRVAMLA+LGILVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PSAVTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVN  DIL
Sbjct:    2 VASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.830e-111
Identity = 165/221 (74.66%), Postives = 192/221 (86.88%), Query Frame = 0
Query:    2 MSISTQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            M+ S+ MFLGTAATLIASS+AFV PMAVRS AP +S+ +LKMS G+DY+A+LPGA   +GKIFD L LADGA+  ++KLWREAE+KHGRVAMLA +G++VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FWA+SLLGMAFIEYNTI  AYA PS VTGEGGL+++YSPGDLGFDP  IKPK Q  LE MQ KELNNGRLAMIG+ GMLVQELVN  DILG
Sbjct:    1 MAASSNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 4.540e-99
Identity = 156/219 (71.23%), Postives = 175/219 (79.91%), Query Frame = 0
Query:    4 ISTQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            +++QMF+GTAATLIASS+AFVAPMAVRSV  T SSP LKMS GSDYVA+LPGAPFSDGKIFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE                            FWAFSLLGMAFIEYNTI TA+ +PSAVTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    2 VASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.650e-95
Identity = 133/161 (82.61%), Postives = 150/161 (93.17%), Query Frame = 0
Query:   62 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            +IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAF+EYNTI TA+ +PSAVTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 3.610e-95
Identity = 134/160 (83.75%), Postives = 147/160 (91.88%), Query Frame = 0
Query:   62 KIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 221
            KIFDPLGLADGA V D+KLWREAE+KHGRVAMLA+LG+LVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFWAFSLL +A IEYNTIT AYA PS VTGEGGL+++YSPGDLGFDPLN+KP  Q ALE MQTKELNNGRLAMIG+AG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 3.090e-94
Identity = 181/391 (46.29%), Postives = 203/391 (51.92%), Query Frame = 0
Query:    4 ISTQMFLGTAATLIASSSAFVAPMAVRSVA-PTASSPSLKMSTGSDYVASLPGAPFSDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            +++QMF+GTAATLIASS+AFVAP+AVRSVA  T SS SL MS GSDYVA+LPGAPFSDGK                                                                                                                                                                           IFDPLGL+DGA   D+K WREAE+KHGRVAMLA+LG++VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFWAFSLLGMAFIEYNTI TA+ +PSAVTGEGGLKEDY PGDLGFDPLN+KP  + AL+VM+TKELNNGRLAMIG+AGML QELVNPADILG
Sbjct:    2 VASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.440e-82
Identity = 125/219 (57.08%), Postives = 166/219 (75.80%), Query Frame = 0
Query:    5 STQMFLGTAATLIASSSAFVAPMAVR-SVAPTASSPSLKMSTGSDYVASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADILG 222
            ST   +G A+   AS  AF+ P     S  PT  S + +MS GSDYV++LPGAPF+DGK++DP+GL+  A+ +D+K WREAE+KHGRVAMLA++G+LVAE +HP F+GPDYIGPA+ HF+EI+A++P+FWA +LL +A++EY  I   +A    VTGEGG++ DY PGDLGFDPL + P+ +  L VM+TKELN+GRLAMIG+ GM+VQELV P  I G
Sbjct:   55 STGALVGMASWCFASCEAFIVPTPTTLSARPT--STAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271          
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 3.980e-78
Identity = 132/223 (59.19%), Postives = 167/223 (74.89%), Query Frame = 0
Query:    4 ISTQMFLGTAATLIASSSAFVAPMAV--RSVAPTASSPSLKMSTGSDYVASLPGAPF---SDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGILVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITTAYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGRLAMIGVAGMLVQELVNPADIL 221
            +++Q+FLGTAATLIASS+AFVAP+A    S+A  A+S + KM+ GSDY ASLPGAPF   ++GK FDP GLA   + + +K WREAELKHGRV+MLAA+GILV+E +HP FMGP YIGPAV+H Q+I+  YP FW  SL  +AFIE  TI  A+ + S VTG G LK +Y PGDLGFDPL + PK  E   ++Q++EL+ GR AMIGV GM+VQE+V+   IL
Sbjct:    2 VTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.51.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI1.640e-12681.74Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI2.800e-12582.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI6.380e-11878.90Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI1.830e-11174.66Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE4.540e-9971.23LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI1.650e-9582.61Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI3.610e-9583.75Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE3.090e-9446.29LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G5B4_ECTSI1.440e-8257.08Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FQG7_ECTSI3.980e-7859.19Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 53..213
e-value: 5.9E-37
score: 127.7
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 40..222
e-value: 1.5E-39
score: 137.9
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 12..218
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 60..221
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 12..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:237511..240070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.51.3mRNA_P-littoralis_Contig148.51.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 236441..240198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.51.3 ID=prot_P-littoralis_Contig148.51.3|Name=mRNA_P-littoralis_Contig148.51.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MMSISTQMFLGTAATLIASSSAFVAPMAVRSVAPTASSPSLKMSTGSDYV
ASLPGAPFSDGKIFDPLGLADGANVKDVKLWREAELKHGRVAMLAALGIL
VAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWAFSLLGMAFIEYNTITT
AYASPSAVTGEGGLKEDYSPGDLGFDPLNIKPKSQEALEVMQTKELNNGR
LAMIGVAGMLVQELVNPADILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln