prot_P-littoralis_Contig1476.3.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1476.3.4
Unique Nameprot_P-littoralis_Contig1476.3.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length252
Homology
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BLAST of mRNA_P-littoralis_Contig1476.3.4 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 4.650e-6
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0 
Query:  185 KVTVEKPDLGGRGSVKSITLNGIDVMNWMKDNALSTAEGHICKKQDLALMLSEVSGVQPCRGISRQHV 252
            +V VEKPD+ GRGS++ I++NG+DV +    +A+ST    I   +DL  +L  V  V PC G +RQH+
Sbjct:    3 QVVVEKPDIQGRGSIRYISMNGLDVTS---HDAISTVGRFIYSLEDLKQVLRIVDSVLPCLGYARQHM 67
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1476.3.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JR14_9PHAE4.650e-644.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1476contigP-littoralis_Contig1476:5292..6880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1476.3.4mRNA_P-littoralis_Contig1476.3.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1476 5267..6880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1476.3.4 ID=prot_P-littoralis_Contig1476.3.4|Name=mRNA_P-littoralis_Contig1476.3.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp
MLSTPEKDEGGPRTRSHTTPTTSDRALESDRCAPRPRVWTPASIATLEFG
FLCWDEPNSLTSMLPVCLWLKHHKRSGKVKTGTSAQALVWVREWLATSEY
AGIVGFDATPYSIGHMFVRLLKHKNYFCLDVAGMQKKAKVYSIQSCEWGD
TYIDLLKSLPLQWSATRLPDTSMVFSRDDQGAIVKVTVEKPDLGGRGSVK
SITLNGIDVMNWMKDNALSTAEGHICKKQDLALMLSEVSGVQPCRGISRQ
HV
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