prot_P-littoralis_Contig147.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig147.36.1
Unique Nameprot_P-littoralis_Contig147.36.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length129
Homology
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: D7G2C5_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C5_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 8.170e-84
Identity = 124/128 (96.88%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            MAEDGVNPKAYPL+GPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++CSVTTNEASQLKSQI+TLKDQIEQLLI
Sbjct:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A835Z1Z7_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z7_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.750e-75
Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 0
Query:    4 DGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            D +NPKAYPL+G DLTVTILDL+QQA+NYKQLKKGANEATKTLNRGISEFIVMAADA+PLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIS SVTTNEASQLK QI +LKDQIEQLLI
Sbjct:    3 DEINPKAYPLAGADLTVTILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADADPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISASVTTNEASQLKEQIQSLKDQIEQLLI 127          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A7S2FW40_9STRA (Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2FW40_9STRA)

HSP 1 Score: 220 bits (560), Expect = 4.230e-72
Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            MAE  VNPKAYPL+  ++TV ILDL+QQA NYKQLKKGANEATKTLNRGISEF+V+AADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVT+NEASQLK QI T+KD IEQLLI
Sbjct:    1 MAE--VNPKAYPLADAEMTVKILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQLKDQIQTMKDNIEQLLI 126          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: L1I7R9_GUITC (Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 RepID=L1I7R9_GUITC)

HSP 1 Score: 218 bits (555), Expect = 2.450e-71
Identity = 109/123 (88.62%), Postives = 116/123 (94.31%), Query Frame = 0
Query:    6 VNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            VNPKA+PL+ PDL+VTIL+L+QQASNYKQLKKGANEATKTLNRGISEFIVMAAD EPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSRPVI+ SVTTNE SQLK QI TLKDQIE+LLI
Sbjct:    4 VNPKAFPLAPPDLSVTILELVQQASNYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTTNEGSQLKGQIQTLKDQIEKLLI 126          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A7S2XVU5_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVU5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.240e-71
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    3 EDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            E   NPKAYPL+GP+LTV+I DL QQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ALGRACGVSRPVI+ S+TTNEASQLK QI   KD IEQLLI
Sbjct:    7 ELATNPKAYPLAGPELTVSIYDLTQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIAASITTNEASQLKEQIQRTKDAIEQLLI 132          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A7S1CD40_9STRA (Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD40_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.670e-70
Identity = 107/126 (84.92%), Postives = 116/126 (92.06%), Query Frame = 0
Query:    3 EDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            +DGVNPKA+PL+  +L V ILDLIQQASNYKQLKKGANEATKTLNRGISE IV+ ADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI+CS+TTNE SQLK QI T+KD IE+LLI
Sbjct:    6 KDGVNPKAFPLADAELVVKILDLIQQASNYKQLKKGANEATKTLNRGISELIVLTADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEGSQLKPQINTMKDAIERLLI 131          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A022QHN0_ERYGU (Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A022QHN0_ERYGU)

HSP 1 Score: 216 bits (549), Expect = 2.150e-70
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            M  D VNPKAYPL+   LT+TILDL+QQ +NYKQLKKGANEATKTLNRGISEF+VMAADAEPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVTTNE SQL++QIL LKD IE+LLI
Sbjct:    1 MTADAVNPKAYPLADAQLTITILDLVQQGANYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLRAQILQLKDAIEKLLI 128          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A7J7GND5_CAMSI (Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GND5_CAMSI)

HSP 1 Score: 214 bits (545), Expect = 8.750e-70
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TILDL+QQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NEASQLKSQI  LKD IE+LLI
Sbjct:    1 MTAEAVNPKAYPLADSQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A804K312_MUSAM (Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A804K312_MUSAM)

HSP 1 Score: 213 bits (543), Expect = 1.770e-69
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            M+ + VNPKAYPL+   LT+TILDLIQQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQI  LKD IE+LLI
Sbjct:    1 MSTEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Match: A0A6A3D174_HIBSY (Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A3D174_HIBSY)

HSP 1 Score: 213 bits (542), Expect = 2.680e-69
Identity = 107/128 (83.59%), Postives = 114/128 (89.06%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQILTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT TILDL+QQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVISCSVTTNE SQLKSQI  LKD IE+LLI
Sbjct:    3 MTGEPVNPKAYPLADAQLTTTILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKKALGRACGVTRPVISCSVTTNEGSQLKSQIQQLKDAIEKLLI 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C5_ECTSI8.170e-8496.88Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835Z1Z7_9STRA2.750e-7591.20Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S2FW40_9STRA4.230e-7286.72Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 ... [more]
L1I7R9_GUITC2.450e-7188.62Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 ... [more]
A0A7S2XVU5_9STRA4.240e-7186.51Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A7S1CD40_9STRA1.670e-7084.92Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 T... [more]
A0A022QHN0_ERYGU2.150e-7082.81Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=143... [more]
A0A7J7GND5_CAMSI8.750e-7082.81Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4... [more]
A0A804K312_MUSAM1.770e-6982.81Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A... [more]
A0A6A3D174_HIBSY2.680e-6983.59Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=143... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2-likePRINTSPR00883NUCLEARHMGcoord: 38..48
score: 87.27
coord: 8..21
score: 47.14
coord: 82..94
score: 81.54
coord: 21..36
score: 60.0
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 6.2E-53
score: 179.8
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 6..126
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 4.9E-27
score: 93.5
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 4..128
NoneNo IPR availablePANTHERPTHR23105:SF158NHP2-LIKE PROTEIN 1coord: 4..128
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig147contigP-littoralis_Contig147:238435..241817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig147.36.1mRNA_P-littoralis_Contig147.36.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig147 238269..242664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig147.36.1 ID=prot_P-littoralis_Contig147.36.1|Name=mRNA_P-littoralis_Contig147.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=129bp
MAEDGVNPKAYPLSGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI
SCSVTTNEASQLKSQILTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002415H/ACA_rnp_Nhp2-like
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004037Ribosomal_L7Ae_CS