prot_P-littoralis_Contig143.59.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig143.59.2
Unique Nameprot_P-littoralis_Contig143.59.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length338
Homology
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.290e-85
Identity = 177/273 (64.84%), Postives = 191/273 (69.96%), Query Frame = 0
Query:   71 MAAARSGARGNPSXXXXXXXXXXXXXXXXIGKRKPRHAPSSTTTPADAPVTSSTGWGAKRRLSPGAAPIAGRSGGTRV--TGAA-GMGGRGRGNTSSYGGAVAAGXXX---GRGGVSTRGLHDSRPFTPRSNSLGEIPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKLSSRDFD 337
            MAAARSG  G                     KRKPRHA                  GAKRRLS G       S GT    TGAA G+GGRGRG  S         XXX   GRG ++ RGLHD RP+TPR  S GE+PEDQLQ+SF+RASGAGGQNVNKVSTKVE+RFVVSEAEWLP+DVRLRLARQE GR+NNKGEL+VTAQEFR   TQKQNRSQAL KLREMINE+WEPAKERKMRTGI KKGK IRKQ+KLHRSKVKAGRSKLSSRD+D
Sbjct:    1 MAAARSGTGGGSPKKSAGSS----------NKRKPRHAXXXXXXXXR---------GAKRRLSSGPEGGPAASPGTVPWGTGAAEGVGGRGRGQASXXXXXXXXXXXXXXXGRGTIA-RGLHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFR---TQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSKVKAGRSKLSSRDYD 250          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.610e-32
Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 0
Query:  201 IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            IPEDQ+Q+SF+RASGAGGQNVNKV+TKVELRF +  A W+P +VR RL   E GRINN+G   +T QE R   TQ QNR +A+ KL++++  SW+  K RK+R G+ KK KE R++ K   S+ K  R ++
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENR---TQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENKKKISQKKENRRRV 253          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 122 bits (306), Expect = 1.070e-30
Identity = 70/128 (54.69%), Postives = 86/128 (67.19%), Query Frame = 0
Query:  201 IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGR 328
            IPEDQ+Q SF+R+SGAGGQNVNKV TKVELRF +  A W+P +VR RL   E  RINN G + V +QE+R   TQ QNR  AL KL +++  SW   K RKMR G+  K KE R++ K   S+ KA R
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYR---TQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANR 127          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 125 bits (313), Expect = 1.460e-30
Identity = 74/153 (48.37%), Postives = 101/153 (66.01%), Query Frame = 0
Query:  192 TPRSNSLG-------------EIPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            TPR+N+ G             +IPE+ L  SF R+SGAGGQNVNKV+++V+LR  V+EA W+P++VR RL +Q+  RI+ +G L + AQE R   TQ  NR  A+ KLR+M+ ++W   KER++R GI  K KE RK+ K  RS VKAGR K+
Sbjct:   77 TPRNNNNGSNNHDNWKVPEYIDIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHR---TQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKKV 226          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 120 bits (301), Expect = 1.620e-28
Identity = 67/131 (51.15%), Postives = 89/131 (67.94%), Query Frame = 0
Query:  201 IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            IPE++LQI+F+RASGAGGQNVNKV+TKVE+RF +  AEW+P +VR RL   E  RINN+G + +T+QE R   TQ QNR  A+ KL++++  SW   K RK R G  +K KE R + K   S  K  R ++
Sbjct:  127 IPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHR---TQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNSLKKQSRGRV 254          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 119 bits (297), Expect = 3.060e-28
Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 0
Query:  200 EIPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            +IPE+ L  SF R+SGAGGQNVNKV+++V++R  V EA W+P++VR RL +Q+  RI+ +G L + AQE R   TQ  NR  A+ KL+ M+ ++W   KER+MR GI  K KE RK+ K  RS VK GR K+
Sbjct:   97 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHR---TQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKKV 225          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 115 bits (288), Expect = 1.540e-26
Identity = 65/132 (49.24%), Postives = 88/132 (66.67%), Query Frame = 0
Query:  200 EIPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            EIPED++ ISFSR+ G+GGQNVNKV+TKVELRF + +A+WLP +VR R+  Q   RIN  G   + + E R   TQ+QNR  A  KL+E++  ++   K RK+R GI KK KE   ++K  R +VKA R  +
Sbjct:  133 EIPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENR---TQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANRKSV 261          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A8J5Y1J9_DIALT (RF_PROK_I domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y1J9_DIALT)

HSP 1 Score: 110 bits (276), Expect = 6.320e-26
Identity = 62/131 (47.33%), Postives = 89/131 (67.94%), Query Frame = 0
Query:  201 IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGRSKL 331
            +P+ ++QI+ SR+SG GGQNVNKV+TKVELRF V  A+WLP DV+ RL    + R+N +GEL+VTA E R   +Q  N   AL K++E+++ +  P KER+MR G+    K  R ++K   +KVK  RS++
Sbjct:   33 VPKAKMQIAHSRSSGPGGQNVNKVNTKVELRFNVRAADWLPADVKARLIDDNSNRMNKEGELIVTASESR---SQSANMDSALRKVQELVDVACIPPKEREMRVGLSAVTKRQRVEDKRRTAKVKQSRSRV 160          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: W7T6I3_9STRA (Peptidyl-trna hydrolase mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6I3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.690e-25
Identity = 61/129 (47.29%), Postives = 86/129 (66.67%), Query Frame = 0
Query:  200 EIPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGR 328
            EIP D+L  S+SR+SG GGQNVNK++T+VELRF V +A+W+P D+R R   Q+  R+N  GE ++++QE R   TQ +NR + + KL E +  +    K R MRTG+ +  KE R +EK  RS+ KA R
Sbjct:   81 EIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHR---TQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKKKRSEKKASR 206          
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR)

HSP 1 Score: 107 bits (266), Expect = 7.800e-25
Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = 0
Query:  201 IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLARQENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKERKMRTGIGKKGKEIRKQEKLHRSKVKAGR 328
            +PE QL+ SF R+ GAGGQNVNKV+T V+++  +    W+P +VR RL +Q+  R++ +  L++   E R   TQ  NR  A++KLR MI ++WE  KER +RTGI  K KE RK  K  RS VK GR
Sbjct:    3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHR---TQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRSLVKQGR 127          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.59.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI1.290e-8564.84RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2PK85_9STRA2.610e-3253.44Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C3Q8_THAPS1.070e-3054.69RF_PROK_I domain-containing protein (Fragment) n=1... [more]
A0A1Z5KFY9_FISSO1.460e-3048.37Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
K0R9L2_THAOC1.620e-2851.15RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A1Z5KKA6_FISSO3.060e-2850.76Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S1D533_CYCTE1.540e-2649.24Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J5Y1J9_DIALT6.320e-2647.33RF_PROK_I domain-containing protein n=1 Tax=Diacro... [more]
W7T6I3_9STRA6.690e-2547.29Peptidyl-trna hydrolase mitochondrial-like protein... [more]
A0A8J9S3S9_PHATR7.800e-2547.66Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..292
NoneNo IPR availableGENE3D3.30.160.20coord: 196..335
e-value: 1.9E-36
score: 126.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..203
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 197..330
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 200..296
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 200..328
e-value: 4.7E-21
score: 74.9
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 212..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:221351..225263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.59.2mRNA_P-littoralis_Contig143.59.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig143 221351..228824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig143.59.2 ID=prot_P-littoralis_Contig143.59.2|Name=mRNA_P-littoralis_Contig143.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MRWGSGMAMMTLVLASRRGLSLLASFPSRCSIPAAFRPASLAAAAAAAAA
PPPPPYRYGAPIGILAAPLSMAAARSGARGNPSSSNNNNSNINNNSSSSI
GKRKPRHAPSSTTTPADAPVTSSTGWGAKRRLSPGAAPIAGRSGGTRVTG
AAGMGGRGRGNTSSYGGAVAAGGRGGRGGVSTRGLHDSRPFTPRSNSLGE
IPEDQLQISFSRASGAGGQNVNKVSTKVELRFVVSEAEWLPHDVRLRLAR
QENGRINNKGELLVTAQEFRPVTTQKQNRSQALNKLREMINESWEPAKER
KMRTGIGKKGKEIRKQEKLHRSKVKAGRSKLSSRDFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I