prot_P-littoralis_Contig143.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig143.38.1
Unique Nameprot_P-littoralis_Contig143.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1006
Homology
BLAST of mRNA_P-littoralis_Contig143.38.1 vs. uniprot
Match: D8LC09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC09_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 1.330e-139
Identity = 241/411 (58.64%), Postives = 284/411 (69.10%), Query Frame = 0
Query:    1 MMNSAKGRLVYLTAVFVG-QLVGFASAAPKCTRMANQWAVVFPAECTEWFEQTRGRRGSAPESCSQEISATVSVDAFPWNDGVVIVDNETPREDFSLQPEQDVIKYGAGVVIMQTSWDM-DGWSWYPRTISSAERIYSEVKYISSDEKTYLDFDLTVRYEPYDLP--------SDSNSSRRLVGDRLLVSKGITSPDHDVAEDEDGGSTYYPTYRYSYEQESYDFVHSFELEDVDSYAFEYVDPASLEGQSSALSHSYSFXXXXXXXGELEGRSPPSXXXXXXAAVQSVTAMDIYVCTDVDNSLAELRFNCNPDNDGDAQCFAEAGPANIRALEIHGMDMYCDKECLPGQIDGIWCDIFGLDGCRMCTDDCTSICDSEAICSSCITCDRTASGVVSTEAPSSGGTDGSRGL 401
            MM SA GR   L AV +G Q  G A AAP C R+A QWAV+F AECT+WF+Q   RRGS PESC Q+ ++ V V+ FPWND VVIVDNETP +DFSLQPEQ V+K+GAG+VIMQTSWDM DG  W PR  SSAERIY+EV+YI+SD  +YLDFDL+VRYEP   P        S+ N +        ++    T P   +A+D  G  +Y P Y YSYE ESYDF    ELED+DSY++E++D +  E +SS  S +YS+       GE E   PP       +AVQSVT++DIYVCTD DN+LAELRFNC+P+NDGDAQCFAEAG  N+RAL IHGMDMYCDK CL GQ  G+WCDIFGLDGCRMCTDDCTSICD EA CSSCI C     G      P S  TDGSRG+
Sbjct:    1 MMISATGRAASLAAVLLGLQQAGLAFAAPTCERVAGQWAVIFSAECTQWFQQIGSRRGSPPESCIQQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERIYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGRLMRALSEDNDAPDAADVEEILELSATPPP--LAQDATGDLSYEPAYVYSYELESYDFSXXXELEDLDSYSYEFID-SMFEEESSPYSQTYSYNFR----GEEEVSVPPP------SAVQSVTSLDIYVCTDEDNNLAELRFNCDPENDGDAQCFAEAGEPNVRALHIHGMDMYCDKVCLAGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILC-----GAPRVPPPPSP-TDGSRGI 392          
BLAST of mRNA_P-littoralis_Contig143.38.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.010e-116
Identity = 236/501 (47.11%), Postives = 289/501 (57.68%), Query Frame = 0
Query:    1 MMNSAKGRLVYLTAVFVG-QLVGFASAAPKCTRMANQWAVVFPAECTEWFEQTRGRRGSAPESCSQE---------------ISATVSVDAFPWNDGVVIVDNETPREDFSLQPEQDVIKYGAGVVIMQTSWDM-DGWSWYPRTISSAERIYSEVKYISSDEKTYLDFDLTVRYEPYDLPSDSNSSRRLVGDRL--------LVSKGITSPDHDVAEDEDGGSTYYPTYRYSYEQESYDFVHSFELEDVDSYAFEYVDPASLEGQSSALSHSYSFXXXXXXXGELEGRSPPSXXXXXXAAVQSVTAMDIYVCTDVDNSLAELRFNCNPDNDGDAQCFAEAGPANIRALEIH---------------------------------------------------------------------------GMDMYCDKECLPGQIDGIWCDIFGLDGCRMCTDDCTSICDSEAICSSCITCDRTASGVVSTEAPSSGGTDGSRGL 401
            M+ SA GR+ +L AV +G Q  G A AAP C R+A+QWAV+F AECT+WF+Q   RRGS PESC Q+                ++ V V+ FPWND VVIVDNETP +DFSLQPEQ V+K+GAG+VIMQTSWDM DG  W PR  SSAER+Y+EV+YI+SD  +YLDFDL+VRYEP   P  S +      D+         ++    T P   +A+D +G  +Y P Y YSYE ESYDF ++FELED+DSY++E++D +  E + S  S +YS+       GE     PPS       AVQSVT++DIYVCTD D +LAELRFNC+ +NDGDAQCFAEAG  N+RAL+IH                                                                           GMDMYCDK CLPGQ  G+WCDIFGLDGCRMCTDDCTSICD EA CSSCI C    +       P+   TDGSRG+
Sbjct:    1 MIMSATGRVAFLAAVLLGLQQAGLAFAAPTCERVASQWAVIFSAECTQWFQQIGSRRGSPPESCIQDPTWNHCMSNMRHDKQFTSAVLVENFPWNDDVVIVDNETPGDDFSLQPEQPVLKFGAGIVIMQTSWDMEDGSLWQPRMSSSAERVYAEVEYIASDNHSYLDFDLSVRYEPEHPPPGSLARALSEDDKAPDEADVEEILELSATPPP--LAQDANGDLSYEPAYIYSYELESYDFSYNFELEDLDSYSYEFID-SMFEEEISPYSQTYSYNFRG---GEEVSVPPPS-------AVQSVTSLDIYVCTDEDINLAELRFNCDLENDGDAQCFAEAGEPNVRALQIHVRMKKYIEFPRLKFWCDVVLLHLCLIFVISCVFYFLCVGSKCECEERHGTKLSHLDIRYRKSDTVTLAVTRQAQQGMDMYCDKVCLPGQEGGLWCDIFGLDGCRMCTDDCTSICDGEASCSSCILCGAPRA------PPAPSPTDGSRGI 482          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC09_ECTSI1.330e-13958.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD92_9PHAE1.010e-11647.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..581
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..927
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..927
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 588..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:170292..177476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.38.1mRNA_P-littoralis_Contig143.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig143 170217..177489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig143.38.1 ID=prot_P-littoralis_Contig143.38.1|Name=mRNA_P-littoralis_Contig143.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1006bp
MMNSAKGRLVYLTAVFVGQLVGFASAAPKCTRMANQWAVVFPAECTEWFE
QTRGRRGSAPESCSQEISATVSVDAFPWNDGVVIVDNETPREDFSLQPEQ
DVIKYGAGVVIMQTSWDMDGWSWYPRTISSAERIYSEVKYISSDEKTYLD
FDLTVRYEPYDLPSDSNSSRRLVGDRLLVSKGITSPDHDVAEDEDGGSTY
YPTYRYSYEQESYDFVHSFELEDVDSYAFEYVDPASLEGQSSALSHSYSF
GHSYSFGGELEGRSPPSPPPPPPAAVQSVTAMDIYVCTDVDNSLAELRFN
CNPDNDGDAQCFAEAGPANIRALEIHGMDMYCDKECLPGQIDGIWCDIFG
LDGCRMCTDDCTSICDSEAICSSCITCDRTASGVVSTEAPSSGGTDGSRG
LETTSPTPSGTDGSRGLETISPTSSPTSSPAGSYGPTAGMPTPIEAVLTP
APSGTEGSRGLETLSPTVYSGPSAGMPTANETAAPSAAVRQVTVAPTVGD
GSTGVPSSTPPPRTTEDTAPPTSTMPSAVETPAPITTDGSRGESLGSAAP
TTAMMPSSMETAAPTTTDGSRGESLESAAPTTDMMPTALVTAAPTTTDGS
RGEPLESAAPTTDMMPSSMETAAPTTTDGSRGQPLGSAAPTTAMMPSSME
TAVPTTTGGSRGEPLESAAPTTDMMPTAIETAAPTTTGGSRGEPLSSAAP
TSDMMPTAIETAAPTTTDGSRGQPLESAAPTTAMMPSSMETAAPTTTDGI
RGESLESAAPTTSMMPTATATAAPTTTDGSRGESLESAAPTTVMMPTAAE
TTAPSFTDGSMLPLSSAAPTTAMVPSPTESAAPTTTDGSRGLETYSPSTF
EMTFSPSQGPTGFEIASPTSSLRGSGTASPTAVSRRGTEHETGSPTASND
GYGGFETASPTTSGGENSMVSTAPTSGFDECTPGDPETCYDKLDPSMRGR
LDDRSRGLTCEESCIVGGGLWCNALGLNGCRLCATSCDNFCARQGLPDGC
DCIEC*
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